C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000704_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000062725-ENSG00000170836 CGP 9606 17:60443149-60666280
GeneTranscriptPositionBiotype
ENSG00000062725 (APPBP2)
amyloid beta precursor protein (cytoplasmic tail) binding protein 2 		ENST00000083182 (APPBP2-001) 60443149-60526219 protein_coding
ENST00000585368 (APPBP2-003) 60494474-60526123 protein_coding
ENST00000588668 (APPBP2-004) 60479162-60525938 nonsense_mediated_decay
ENST00000589341 (APPBP2-002) 60447746-60526132 nonsense_mediated_decay
ENST00000590244 (APPBP2-005) 60466351-60526098 processed_transcript
ENST00000592995 (APPBP2-006) 60459507-60465161 processed_transcript
ENSG00000170836 (PPM1D)
protein phosphatase, Mg2+/Mn2+ dependent, 1D 		ENST00000305921 (PPM1D-001) 60600183-60666280 protein_coding
ENST00000392995 (PPM1D-002) 60600269-60664473 nonsense_mediated_decay
ENST00000590418 (PPM1D-004) 60604594-60633957 protein_coding
ENSG00000200013 (RNU6-623P)
RNA, U6 small nuclear 623, pseudogene 		ENST00000363143 (RNU6-623P-201) 60662333-60662437 snRNA
ENSG00000259349 (RP11-15E18.1)
 ENST00000558027 (RP11-15E18.1-001) 60526299-60550798 antisense
ENST00000559739 (RP11-15E18.1-002) 60526293-60550766 antisense
ENSG00000266943 (RP11-15E18.2)
 ENST00000592196 (RP11-15E18.2-001) 60564740-60565671 processed_pseudogene
ENSG00000267678 (RP11-15E18.3)
 ENST00000589465 (RP11-15E18.3-001) 60562010-60562161 processed_pseudogene
ENSG00000267772 (RP11-15E18.4)
 ENST00000592917 (RP11-15E18.4-001) 60564547-60586623 lincRNA
ENSG00000270553 (RP11-15E18.5)
 ENST00000605540 (RP11-15E18.5-001) 60513190-60513550 processed_pseudogene
CIL_000704_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018481-ENSMUSG00000020525 CGP 10090 11:85187262-85347066
GeneTranscriptPositionBiotype
ENSMUSG00000018481 (Appbp2)
amyloid beta precursor protein (cytoplasmic tail) binding protein 2 		ENSMUST00000018625 (Appbp2-001) 85187262-85235130 protein_coding
ENSMUSG00000020525 (Ppm1d)
protein phosphatase 1D magnesium-dependent, delta isoform 		ENSMUST00000020835 (Ppm1d-001) 85311244-85347066 protein_coding
ENSMUST00000127717 (Ppm1d-002) 85312164-85337203 protein_coding
ENSMUSG00000048248 (Appbp2os)
 ENSMUST00000050015 (Appbp2os-201) 85234775-85235223 pseudogene
ENSMUSG00000080791 (Akirin1-ps)
akirin 1, pseudogene 		ENSMUST00000119676 (Akirin1-ps-001) 85216597-85217054 processed_pseudogene
ENSMUSG00000088136 (Gm22587)
predicted gene, 22587 		ENSMUST00000157511 (Gm22587-201) 85297452-85297749 misc_RNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000704_0001ENSG00000062725ENST00000083182ENST00000585368ENST00000588668ENST00000589341ENST00000590244ENST00000592995ENSG00000170836ENST00000305921ENST00000392995ENST00000590418ENSG00000200013ENST00000363143ENSG00000259349ENST00000558027ENST00000559739ENSG00000266943ENST00000592196ENSG00000267678ENST00000589465ENSG00000267772ENST00000592917ENSG00000270553ENST00000605540CIL_000704_0002ENSMUSG00000018481ENSMUST00000018625ENSMUSG00000020525ENSMUST00000020835ENSMUST00000127717ENSMUSG00000048248ENSMUST00000050015ENSMUSG00000080791ENSMUST00000119676ENSMUSG00000088136ENSMUST00000157511
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000704_0001ENSG00000062725ENST00000083182ENST00000589341ENSG00000170836ENST00000305921ENST00000392995ENST00000590418ENSG00000200013ENST00000363143ENSG00000259349ENST00000558027ENST00000559739ENSG00000266943ENST00000592196ENSG00000267678ENST00000589465ENSG00000267772ENST00000592917ENSG00000270553ENST00000605540CIL_000704_0002ENSMUSG00000018481ENSMUST00000018625ENSMUSG00000020525ENSMUST00000020835ENSMUST00000127717ENSMUSG00000048248ENSMUST00000050015ENSMUSG00000080791ENSMUST00000119676ENSMUSG00000088136ENSMUST00000157511
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000062725 ENST00000083182 2.679±0.00 1.004±0.00 N/A 4.536±0.00 2.688±1.40 1.875±0.78 1.710±1.02 4.496±0.00 3.286±2.80 2.416±1.38 0.278±0.00 4.028±2.17 2.016±1.21 5.223±0.00
ENST00000585368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589341 N/A N/A 1.994±0.00 N/A 2.551±0.00 2.632±0.00 0.783±0.00 N/A N/A 2.456±0.63 1.488±0.00 3.282±0.94 5.432±0.00 25.504±12.53
ENST00000590244 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170836 ENST00000305921 1.537±0.00 1.206±0.00 0.428±0.00 0.868±0.41 1.296±0.00 0.957±0.37 0.670±0.00 1.129±0.00 0.496±0.30 1.000±0.45 0.902±0.00 1.925±1.10 1.610±0.46 2.947±0.00
ENST00000392995 1.970±0.00 1.905±0.00 0.299±0.00 1.067±0.21 1.971±0.59 1.952±0.89 1.303±0.47 2.716±0.62 0.926±0.43 1.470±0.32 1.793±0.00 2.795±1.12 4.765±0.83 8.835±3.00
ENST00000590418 N/A N/A 1.711±0.00 N/A N/A 3.012±0.00 N/A N/A N/A 2.430±0.00 N/A N/A N/A 9.337±0.00
ENSG00000200013 ENST00000363143 N/A N/A N/A N/A 1.405±0.00 1.515±0.00 N/A N/A N/A N/A N/A 2.383±0.00 N/A N/A
ENSG00000259349 ENST00000558027 0.070±0.00 0.098±0.00 N/A 0.166±0.00 N/A N/A 0.065±0.00 0.078±0.00 N/A 0.384±0.00 0.388±0.00 0.228±0.10 0.166±0.07 0.424±0.25
ENST00000559739 N/A 0.174±0.00 N/A N/A 0.274±0.00 N/A N/A N/A N/A N/A N/A 0.043±0.00 N/A 0.592±0.13
ENSG00000266943 ENST00000592196 N/A N/A N/A N/A 0.055±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.073±0.00
ENSG00000267678 ENST00000589465 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.404±0.12
ENSG00000267772 ENST00000592917 0.066±0.00 N/A N/A N/A 0.024±0.00 N/A N/A N/A 0.099±0.00 N/A N/A N/A 0.072±0.00 0.312±0.04
ENSG00000270553 ENST00000605540 0.064±0.00 0.032±0.00 0.259±0.00 0.032±0.00 N/A 0.281±0.25 0.242±0.10 0.450±0.00 0.609±0.53 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018481 ENSMUST00000018625 8.613±2.22 8.257±0.84 10.875±0.06 14.272±5.16 5.552±2.10 4.748±1.70 3.567±0.63 7.573±0.28 5.538±1.86 6.608±2.53 2.066±0.24 10.107±4.43 16.096±5.12 6.626±1.84
ENSMUSG00000020525 ENSMUST00000020835 4.460±1.45 6.288±0.95 4.029±0.10 5.744±2.59 4.754±1.12 3.690±0.38 1.803±0.05 3.901±0.34 5.582±5.18 4.824±0.35 1.708±0.22 6.405±1.39 10.443±4.52 53.508±16.61
ENSMUST00000127717 N/A N/A N/A 6.476±0.00 N/A N/A N/A N/A N/A N/A N/A 9.734±0.00 20.363±7.07 157.249±0.00
ENSMUSG00000048248 ENSMUST00000050015 18.633±0.00 83.308±21.87 N/A N/A 31.899±1.43 25.455±3.78 N/A 16.302±1.69 7.497±1.71 20.669±6.74 N/A 90.682±13.94 N/A N/A
ENSMUSG00000080791 ENSMUST00000119676 0.155±0.00 0.166±0.00 0.119±0.03 0.323±0.12 N/A 0.212±0.07 0.168±0.06 0.123±0.00 0.157±0.06 0.133±0.00 N/A 0.380±0.03 0.321±0.07 0.206±0.06
ENSMUSG00000088136 ENSMUST00000157511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.676±0.33

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