C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myotubularin related protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000063601 MTMR1 9606 + X:150692971-150765103 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000370387 MTMR1-004 150735399-150751289 retained_intron
  ENST00000370390 MTMR1-013 150693374-150765103 protein_coding
  ENST00000429965 MTMR1-005 150692983-150730122 protein_coding
  ENST00000434699 MTMR1-010 150693009-150730120 protein_coding
  ENST00000436701 MTMR1-007 150699208-150727765 protein_coding
  ENST00000438018 MTMR1-006 150699208-150727765 protein_coding
  ENST00000439546 MTMR1-009 150692978-150730129 protein_coding
  ENST00000445323 MTMR1-002 150693410-150765102 protein_coding
  ENST00000485376 MTMR1-001 150693366-150765102 nonsense_mediated_decay
  ENST00000488357 MTMR1-003 150718677-150764924 nonsense_mediated_decay
  ENST00000490316 MTMR1-008 150693379-150727770 protein_coding
  ENST00000493480 MTMR1-011 150727113-150730565 retained_intron
  ENST00000493995 MTMR1-012 150692971-150731475 protein_coding
  ENST00000542156 MTMR1-201 150693396-150735499 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000370387ENST00000370390ENST00000445323ENST00000493480ENST00000493995
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000370387 N/A N/A 0.899±0.00 N/A N/A 0.651±0.00 N/A N/A N/A N/A N/A N/A
ENST00000370390 N/A N/A 0.771±0.00 N/A 0.364±0.00 0.515±0.00 N/A N/A N/A N/A N/A N/A
ENST00000445323 2.396±0.00 1.457±0.00 2.937±0.00 1.561±0.00 2.700±0.00 N/A 1.408±0.14 1.857±0.00 1.927±0.00 3.966±2.65 0.884±0.00 3.359±2.60
ENST00000493480 N/A N/A N/A N/A 1.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493995 N/A N/A N/A N/A N/A N/A N/A 3.417±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PJ CIL_0000PJ_0002 CGP X:150568619-150765103
CIL_0007GF CIL_0007GF_0002 CGP X:150692971-150898816

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004438 ISS phosphatidylinositol-3-phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0005886 ISS plasma membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006661 TAS phosphatidylinositol biosynthetic process
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046856 IDA phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022378 mtmr1b myotubularin related protein 1b protein_coding Danio_rerio
ENSDARG00000056690 mtmr1a myotubularin related protein 1a protein_coding Danio_rerio
ENSMUSG00000015214 Mtmr1 myotubularin related protein 1 protein_coding Mus_musculus

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