C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myotubularin related protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000485376 MTMR1-001 ENSG00000063601 9606 + X:150693366-150765102 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PJ CIL_0000PJ_0002 CGP X:150568619-150765103
CIL_0007GF CIL_0007GF_0002 CGP X:150692971-150898816

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004438 ISS phosphatidylinositol-3-phosphatase activity
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 ISS cytoplasm
GO:0005829 TAS cytosol
GO:0005886 ISS plasma membrane
GO:0006644 TAS phospholipid metabolic process
GO:0006661 TAS phosphatidylinositol biosynthetic process
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0044281 TAS small molecule metabolic process
GO:0046856 IDA phosphatidylinositol dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000015358 Mtmr1-201 protein_coding Mus_musculus 0 2191
ENSMUST00000114601 Mtmr1-001 protein_coding Mus_musculus 0 2189
ENSMUST00000130179 Mtmr1-009 retained_intron Mus_musculus 0 974
ENSMUST00000132837 Mtmr1-005 protein_coding Mus_musculus 0 922
ENSMUST00000146213 Mtmr1-002 protein_coding Mus_musculus 0 614
ENSMUST00000156756 Mtmr1-006 protein_coding Mus_musculus 0 372
ENSMUST00000130909 Mtmr1-004 protein_coding Mus_musculus 0 372
ENSMUST00000149323 Mtmr1-003 protein_coding Mus_musculus 0 370
ENSMUST00000138565 Mtmr1-008 retained_intron Mus_musculus 0 243
ENSMUST00000156307 Mtmr1-007 retained_intron Mus_musculus 0 226

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