C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000PJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037560-ENSDARG00000056690 CGP 7955 7:26973882-27002780
GeneTranscriptPositionBiotype
ENSDARG00000037560 (mtm1)
myotubularin 1 		ENSDART00000149835 (mtm1-001) 26973882-26980468 protein_coding
ENSDARG00000056690 (mtmr1a)
myotubularin related protein 1a 		ENSDART00000079218 (mtmr1a-201) 26984279-27002768 protein_coding
ENSDART00000148780 (mtmr1a-001) 26984248-27002780 protein_coding
CIL_0000PJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171100-ENSG00000063601 CGP 9606 X:150568619-150765103
GeneTranscriptPositionBiotype
ENSG00000063601 (MTMR1)
myotubularin related protein 1 		ENST00000370387 (MTMR1-004) 150735399-150751289 retained_intron
ENST00000370390 (MTMR1-013) 150693374-150765103 protein_coding
ENST00000429965 (MTMR1-005) 150692983-150730122 protein_coding
ENST00000434699 (MTMR1-010) 150693009-150730120 protein_coding
ENST00000436701 (MTMR1-007) 150699208-150727765 protein_coding
ENST00000438018 (MTMR1-006) 150699208-150727765 protein_coding
ENST00000439546 (MTMR1-009) 150692978-150730129 protein_coding
ENST00000445323 (MTMR1-002) 150693410-150765102 protein_coding
ENST00000485376 (MTMR1-001) 150693366-150765102 nonsense_mediated_decay
ENST00000488357 (MTMR1-003) 150718677-150764924 nonsense_mediated_decay
ENST00000490316 (MTMR1-008) 150693379-150727770 protein_coding
ENST00000493480 (MTMR1-011) 150727113-150730565 retained_intron
ENST00000493995 (MTMR1-012) 150692971-150731475 protein_coding
ENST00000542156 (MTMR1-201) 150693396-150735499 protein_coding
ENSG00000171100 (MTM1)
myotubularin 1 		ENST00000306167 (MTM1-003) 150568634-150672874 processed_transcript
ENST00000370393 (MTM1-001) 150568625-150596993 processed_transcript
ENST00000370396 (MTM1-002) 150568619-150673322 protein_coding
ENST00000424519 (MTM1-005) 150568622-150639021 protein_coding
ENST00000490530 (MTM1-004) 150568639-150645871 processed_transcript
CIL_0000PJ_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031337-ENSMUSG00000015214 CGP 10090 X:71210767-71419196
GeneTranscriptPositionBiotype
ENSMUSG00000015214 (Mtmr1)
myotubularin related protein 1 		ENSMUST00000015358 (Mtmr1-201) 71364760-71419196 protein_coding
ENSMUST00000114601 (Mtmr1-001) 71364760-71419196 protein_coding
ENSMUST00000130179 (Mtmr1-009) 71393991-71418664 retained_intron
ENSMUST00000130909 (Mtmr1-004) 71369812-71388734 protein_coding
ENSMUST00000132837 (Mtmr1-005) 71364937-71394296 protein_coding
ENSMUST00000138565 (Mtmr1-008) 71391689-71392927 retained_intron
ENSMUST00000146213 (Mtmr1-002) 71364760-71388756 protein_coding
ENSMUST00000149323 (Mtmr1-003) 71369812-71388734 protein_coding
ENSMUST00000156307 (Mtmr1-007) 71391188-71392590 retained_intron
ENSMUST00000156756 (Mtmr1-006) 71369812-71388734 protein_coding
ENSMUSG00000031337 (Mtm1)
X-linked myotubular myopathy gene 1 		ENSMUST00000025391 (Mtm1-201) 71215006-71315295 protein_coding
ENSMUST00000033700 (Mtm1-001) 71215039-71315265 protein_coding
ENSMUST00000061970 (Mtm1-202) 71215006-71315295 protein_coding
ENSMUST00000101501 (Mtm1-004) 71215006-71260810 protein_coding
ENSMUST00000114617 (Mtm1-002) 71215082-71315265 protein_coding
ENSMUST00000114621 (Mtm1-003) 71215028-71315288 protein_coding
ENSMUST00000126208 (Mtm1-010) 71215036-71297580 retained_intron
ENSMUST00000129722 (Mtm1-009) 71301369-71315691 retained_intron
ENSMUST00000134859 (Mtm1-007) 71215031-71298861 retained_intron
ENSMUST00000151415 (Mtm1-005) 71215085-71236686 retained_intron
ENSMUST00000152810 (Mtm1-006) 71215085-71256301 retained_intron
ENSMUST00000156452 (Mtm1-008) 71215059-71310311 retained_intron
ENSMUST00000171933 (Mtm1-203) 71210767-71315295 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PJ_0001ENSDARG00000037560ENSDART00000149835ENSDARG00000056690ENSDART00000079218ENSDART00000148780CIL_0000PJ_0002ENSG00000063601ENST00000370387ENST00000370390ENST00000429965ENST00000434699ENST00000436701ENST00000438018ENST00000439546ENST00000445323ENST00000485376ENST00000488357ENST00000490316ENST00000493480ENST00000493995ENST00000542156ENSG00000171100ENST00000306167ENST00000370393ENST00000370396ENST00000424519ENST00000490530CIL_0000PJ_0003ENSMUSG00000015214ENSMUST00000015358ENSMUST00000114601ENSMUST00000130179ENSMUST00000130909ENSMUST00000132837ENSMUST00000138565ENSMUST00000146213ENSMUST00000149323ENSMUST00000156307ENSMUST00000156756ENSMUSG00000031337ENSMUST00000025391ENSMUST00000033700ENSMUST00000061970ENSMUST00000101501ENSMUST00000114617ENSMUST00000114621ENSMUST00000126208ENSMUST00000129722ENSMUST00000134859ENSMUST00000151415ENSMUST00000152810ENSMUST00000156452ENSMUST00000171933
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000PJ_0001ENSDARG00000037560ENSDART00000149835ENSDARG00000056690ENSDART00000079218ENSDART00000148780CIL_0000PJ_0002ENSG00000063601ENST00000370387ENST00000370390ENST00000445323ENST00000493480ENST00000493995ENSG00000171100ENST00000306167ENST00000370396ENST00000490530CIL_0000PJ_0003ENSMUSG00000015214ENSMUST00000015358ENSMUST00000130179ENSMUST00000132837ENSMUST00000146213ENSMUSG00000031337ENSMUST00000025391ENSMUST00000033700ENSMUST00000061970ENSMUST00000114617ENSMUST00000114621ENSMUST00000129722ENSMUST00000134859ENSMUST00000156452ENSMUST00000171933
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037560 ENSDART00000149835 N/A N/A N/A 2.819±0.00 N/A N/A 3.952±2.82 0.902±0.60 0.593±0.00 N/A N/A N/A N/A N/A
ENSDARG00000056690 ENSDART00000079218 N/A N/A N/A 7.724±4.04 N/A N/A 0.497±0.15 0.502±0.00 0.035±0.00 N/A 0.931±0.00 N/A N/A N/A
ENSDART00000148780 N/A N/A N/A N/A N/A N/A 0.765±0.02 1.111±0.00 N/A N/A 0.353±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000063601 ENST00000370387 N/A N/A N/A N/A 0.899±0.00 N/A N/A 0.651±0.00 N/A N/A N/A N/A N/A N/A
ENST00000370390 N/A N/A N/A N/A 0.771±0.00 N/A 0.364±0.00 0.515±0.00 N/A N/A N/A N/A N/A N/A
ENST00000429965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000434699 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436701 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000438018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445323 2.396±0.00 N/A N/A 1.457±0.00 2.937±0.00 1.561±0.00 2.700±0.00 N/A 1.408±0.14 1.857±0.00 1.927±0.00 3.966±2.65 0.884±0.00 3.359±2.60
ENST00000485376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490316 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493480 N/A N/A N/A N/A N/A N/A 1.138±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000493995 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.417±0.00 N/A N/A N/A N/A
ENST00000542156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171100 ENST00000306167 1.207±0.00 1.156±0.00 N/A 1.527±0.00 0.901±0.00 0.602±0.00 1.777±0.00 0.727±0.00 0.919±0.00 0.893±0.00 1.728±0.00 1.546±0.24 0.480±0.01 1.050±0.00
ENST00000370393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000370396 1.916±0.00 0.458±0.00 0.272±0.00 1.193±0.03 N/A N/A 0.167±0.00 0.535±0.00 N/A 0.867±0.00 0.490±0.07 1.808±0.62 1.077±0.32 2.613±1.11
ENST00000424519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490530 N/A N/A 1.759±0.00 2.514±0.00 N/A N/A 1.350±0.00 N/A N/A 1.716±0.00 1.705±0.00 1.071±0.00 N/A 3.097±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015214 ENSMUST00000015358 2.108±1.16 1.853±0.28 12.141±1.14 3.527±2.05 1.833±1.40 2.099±1.07 0.716±0.02 2.962±0.29 2.154±0.62 2.538±0.70 3.448±2.33 2.202±1.21 2.490±0.95 0.549±0.03
ENSMUST00000114601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130179 2.955±0.58 9.327±1.92 N/A 2.101±0.35 4.984±2.01 3.064±1.12 2.005±0.52 2.012±0.44 1.786±1.14 3.156±1.47 N/A 5.422±1.81 0.968±0.00 0.935±0.47
ENSMUST00000130909 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132837 N/A N/A N/A 7.385±0.00 N/A N/A N/A N/A N/A N/A N/A 5.922±0.00 3.848±1.90 3.642±0.00
ENSMUST00000138565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146213 N/A 11.640±6.38 N/A N/A 5.486±0.94 3.679±1.44 N/A N/A N/A N/A N/A 5.309±0.35 N/A N/A
ENSMUST00000149323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156756 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031337 ENSMUST00000025391 N/A 0.748±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000033700 2.078±0.52 3.159±1.18 3.971±0.51 0.816±0.37 2.521±0.47 6.849±2.27 3.758±0.31 1.941±0.57 2.345±0.64 3.778±0.84 3.251±0.28 1.362±0.64 2.178±1.60 1.224±0.39
ENSMUST00000061970 0.551±0.00 0.735±0.00 N/A 0.277±0.00 1.766±0.00 N/A N/A 0.488±0.05 N/A N/A 0.916±0.00 N/A 1.025±0.00 0.672±0.00
ENSMUST00000101501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000114617 N/A N/A N/A N/A N/A 3.196±1.25 0.740±0.00 N/A 0.676±0.00 1.145±0.00 N/A 0.457±0.19 N/A N/A
ENSMUST00000114621 N/A 1.107±0.00 N/A N/A 1.080±0.00 4.845±1.99 N/A 1.143±0.44 1.270±0.00 N/A N/A 0.837±0.44 N/A N/A
ENSMUST00000126208 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129722 0.410±0.08 0.573±0.15 N/A N/A 0.648±0.05 N/A N/A N/A 0.190±0.00 0.779±0.13 N/A 0.670±0.38 N/A 0.418±0.00
ENSMUST00000134859 N/A N/A N/A 0.205±0.07 N/A N/A N/A N/A N/A N/A N/A 0.324±0.11 N/A N/A
ENSMUST00000151415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156452 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.204±0.00 N/A N/A
ENSMUST00000171933 N/A 0.909±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.697±0.00 N/A 1.007±0.00

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