C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: MEF2BNB-MEF2B readthrough
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064489 MEF2BNB-MEF2B 9606 - 19:19145567-19192158 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354191 MEF2BNB-MEF2B-002 19145569-19192158 nonsense_mediated_decay
  ENST00000444486 MEF2BNB-MEF2B-004 19145567-19192131 protein_coding
  ENST00000514819 MEF2BNB-MEF2B-001 19145584-19192138 protein_coding
  ENST00000602276 MEF2BNB-MEF2B-008 19146868-19182347 processed_transcript
  ENST00000602424 MEF2BNB-MEF2B-201 19145585-19182617 protein_coding
  ENST00000602438 MEF2BNB-MEF2B-006 19149293-19192147 processed_transcript
  ENST00000602689 MEF2BNB-MEF2B-007 19150686-19192122 nonsense_mediated_decay
  ENST00000602804 MEF2BNB-MEF2B-003 19145572-19192158 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverENST00000602689
Transcript ID Liver
ENST00000602689 3.002±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076C CIL_00076C_0001 CGP 19:19145567-19192158

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000978 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0001077 IDA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003677 IEA DNA binding
GO:0003700 NAS sequence-specific DNA binding transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005667 IDA transcription factor complex
GO:0005737 IDA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007507 IEP heart development
GO:0007517 TAS muscle organ development
GO:0030054 IDA cell junction
GO:0042826 IPI histone deacetylase binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093170 mef2b myocyte enhancer factor 2b protein_coding Danio_rerio
ENSMUSG00000002345 2310045N01Rik RIKEN cDNA 2310045N01 gene protein_coding Mus_musculus
ENSMUSG00000079033 Mef2b myocyte enhancer factor 2B protein_coding Mus_musculus

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