C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2310045N01 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002345 2310045N01Rik 10090 + 8:70139499-70167488 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000002418 2310045N01Rik-001 70139499-70147256 protein_coding
  ENSMUST00000110139 2310045N01Rik-004 70140277-70147319 protein_coding
  ENSMUST00000123760 2310045N01Rik-003 70139713-70145549 nonsense_mediated_decay
  ENSMUST00000123976 2310045N01Rik-005 70139707-70145535 retained_intron
  ENSMUST00000129668 2310045N01Rik-002 70139723-70147261 nonsense_mediated_decay
  ENSMUST00000163756 2310045N01Rik-006 70139711-70167488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000002418ENSMUST00000110139ENSMUST00000123976ENSMUST00000129668
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000002418 20.726±0.00 17.463±0.00 16.582±2.60 N/A N/A N/A 6.619±0.00 N/A 8.069±2.98 N/A 2.998±0.76 13.437±1.32 13.922±1.31 12.119±5.40
ENSMUST00000110139 18.742±0.74 20.156±3.74 N/A N/A 24.798±3.54 10.689±1.00 7.090±0.00 16.989±2.15 8.237±2.63 13.771±2.34 N/A 23.386±5.54 13.349±5.63 14.557±0.00
ENSMUST00000123976 13.151±0.00 N/A N/A 25.184±8.78 N/A 25.927±9.56 N/A 12.654±1.44 8.784±3.51 N/A 2.055±0.00 17.329±4.56 7.722±1.28 19.396±5.66
ENSMUST00000129668 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.049±0.00 13.644±2.72 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00076C CIL_00076C_0002 CGP 8:70139499-70167488

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093170 mef2b myocyte enhancer factor 2b protein_coding Danio_rerio
ENSG00000064489 MEF2BNB-MEF2B MEF2BNB-MEF2B readthrough protein_coding Homo_sapiens
ENSG00000213999 MEF2B myocyte enhancer factor 2B protein_coding Homo_sapiens

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