C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 24
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000064652 SNX24 9606 + 5:122843439-123029354 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261369 SNX24-001 122845449-123009212 protein_coding
  ENST00000395451 SNX24-002 122845605-123008161 protein_coding
  ENST00000502387 SNX24-010 122936733-123029354 processed_transcript
  ENST00000503149 SNX24-009 122936734-123007774 nonsense_mediated_decay
  ENST00000506996 SNX24-004 122845626-123002142 protein_coding
  ENST00000507364 SNX24-012 122948596-123002145 processed_transcript
  ENST00000510914 SNX24-011 122946055-123029350 processed_transcript
  ENST00000511211 SNX24-006 122844232-122999984 processed_transcript
  ENST00000511545 SNX24-008 122845663-123007782 nonsense_mediated_decay
  ENST00000513613 SNX24-007 122843439-122998314 processed_transcript
  ENST00000513881 SNX24-003 122845518-123008610 protein_coding
  ENST00000515729 SNX24-013 122998269-123002142 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000261369ENST00000506996ENST00000513881ENST00000515729
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000261369 0.533±0.00 3.904±2.61 0.741±0.00 2.483±0.00 2.213±0.00 6.925±0.00 1.413±0.53 3.059±1.64 1.322±0.00 2.166±0.26 9.961±2.19 2.380±0.29
ENST00000506996 N/A N/A N/A N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A
ENST00000513881 1.317±0.00 0.992±0.00 0.683±0.00 N/A 0.635±0.00 N/A 1.235±0.00 N/A 1.331±0.00 N/A N/A 2.584±0.00
ENST00000515729 N/A N/A N/A 6.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004B0 CIL_0004B0_0001 CGP 5:122774996-123029354
CIL_0004AZ CIL_0004AZ_0001 CGP 5:122843439-123036741

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053527 snx24 sorting nexin 24 protein_coding Danio_rerio
ENSMUSG00000024535 Snx24 sorting nexing 24 protein_coding Mus_musculus

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