C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004AZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000064652-ENSG00000168938 CGP 9606 5:122843439-123036741
GeneTranscriptPositionBiotype
ENSG00000064652 (SNX24)
sorting nexin 24 		ENST00000261369 (SNX24-001) 122845449-123009212 protein_coding
ENST00000395451 (SNX24-002) 122845605-123008161 protein_coding
ENST00000502387 (SNX24-010) 122936733-123029354 processed_transcript
ENST00000503149 (SNX24-009) 122936734-123007774 nonsense_mediated_decay
ENST00000506996 (SNX24-004) 122845626-123002142 protein_coding
ENST00000507364 (SNX24-012) 122948596-123002145 processed_transcript
ENST00000510914 (SNX24-011) 122946055-123029350 processed_transcript
ENST00000511211 (SNX24-006) 122844232-122999984 processed_transcript
ENST00000511545 (SNX24-008) 122845663-123007782 nonsense_mediated_decay
ENST00000513613 (SNX24-007) 122843439-122998314 processed_transcript
ENST00000513881 (SNX24-003) 122845518-123008610 protein_coding
ENST00000515729 (SNX24-013) 122998269-123002142 processed_transcript
ENSG00000168938 (PPIC)
peptidylprolyl isomerase C (cyclophilin C) 		ENST00000306442 (PPIC-001) 123023250-123036741 protein_coding
ENST00000415659 (PPIC-002) 123028493-123036725 retained_intron
ENSG00000263432 (RN7SL689P)
RNA, 7SL, cytoplasmic 689, pseudogene 		ENST00000577215 (RN7SL689P-201) 123022487-123022783 misc_RNA
CIL_0004AZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024535-ENSMUSG00000024538 CGP 10090 18:53245662-53418007
GeneTranscriptPositionBiotype
ENSMUSG00000024535 (Snx24)
sorting nexing 24 		ENSMUST00000025417 (Snx24-201) 53245769-53390823 protein_coding
ENSMUST00000165032 (Snx24-202) 53245662-53390823 protein_coding
ENSMUSG00000024538 (Ppic)
peptidylprolyl isomerase C 		ENSMUST00000025419 (Ppic-201) 53406341-53418007 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AZ_0001ENSG00000064652ENST00000261369ENST00000395451ENST00000502387ENST00000503149ENST00000506996ENST00000507364ENST00000510914ENST00000511211ENST00000511545ENST00000513613ENST00000513881ENST00000515729ENSG00000168938ENST00000306442ENST00000415659ENSG00000263432ENST00000577215CIL_0004AZ_0002ENSMUSG00000024535ENSMUST00000025417ENSMUST00000165032ENSMUSG00000024538ENSMUST00000025419
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004AZ_0001ENSG00000064652ENST00000261369ENST00000506996ENST00000513881ENST00000515729ENSG00000168938ENST00000306442ENST00000415659ENSG00000263432ENST00000577215CIL_0004AZ_0002ENSMUSG00000024535ENSMUST00000025417ENSMUST00000165032ENSMUSG00000024538ENSMUST00000025419
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064652 ENST00000261369 N/A N/A 0.533±0.00 3.904±2.61 0.741±0.00 2.483±0.00 2.213±0.00 6.925±0.00 1.413±0.53 3.059±1.64 1.322±0.00 2.166±0.26 9.961±2.19 2.380±0.29
ENST00000395451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506996 N/A N/A N/A N/A N/A N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513881 N/A N/A 1.317±0.00 0.992±0.00 0.683±0.00 N/A 0.635±0.00 N/A 1.235±0.00 N/A 1.331±0.00 N/A N/A 2.584±0.00
ENST00000515729 N/A N/A N/A N/A N/A 6.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168938 ENST00000306442 16.947±0.00 18.060±0.00 1.246±0.00 0.654±0.00 10.463±6.51 3.528±0.00 7.674±4.78 3.249±0.00 6.574±0.69 7.519±3.99 5.545±1.16 9.602±7.00 57.740±27.14 11.559±4.60
ENST00000415659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.411±0.00 N/A N/A N/A
ENSG00000263432 ENST00000577215 N/A N/A N/A 0.511±0.00 N/A 1.408±0.74 0.614±0.45 2.056±0.00 0.265±0.05 1.456±0.00 0.730±0.00 1.106±0.59 0.428±0.20 0.666±0.52
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024535 ENSMUST00000025417 N/A N/A N/A N/A N/A N/A 1.263±0.00 N/A 1.516±0.47 N/A 1.616±0.25 N/A 5.488±0.00 0.080±0.00
ENSMUST00000165032 3.205±1.31 3.781±0.55 10.081±0.68 4.975±1.17 2.322±1.66 5.141±0.48 2.950±0.32 4.318±0.33 3.926±0.66 5.027±0.83 5.086±0.62 3.534±1.33 6.538±2.93 0.297±0.16
ENSMUSG00000024538 ENSMUST00000025419 89.960±1.43 13.193±2.61 82.620±12.51 9.464±6.21 34.017±1.78 14.844±2.22 12.386±2.44 77.790±10.41 10.187±8.67 68.027±3.29 9.723±0.80 58.937±6.16 46.486±6.03 1.631±0.81

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