C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004B0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000205302-ENSG00000064652 CGP 9606 5:122774996-123029354
GeneTranscriptPositionBiotype
ENSG00000064652 (SNX24)
sorting nexin 24 		ENST00000261369 (SNX24-001) 122845449-123009212 protein_coding
ENST00000395451 (SNX24-002) 122845605-123008161 protein_coding
ENST00000502387 (SNX24-010) 122936733-123029354 processed_transcript
ENST00000503149 (SNX24-009) 122936734-123007774 nonsense_mediated_decay
ENST00000506996 (SNX24-004) 122845626-123002142 protein_coding
ENST00000507364 (SNX24-012) 122948596-123002145 processed_transcript
ENST00000510914 (SNX24-011) 122946055-123029350 processed_transcript
ENST00000511211 (SNX24-006) 122844232-122999984 processed_transcript
ENST00000511545 (SNX24-008) 122845663-123007782 nonsense_mediated_decay
ENST00000513613 (SNX24-007) 122843439-122998314 processed_transcript
ENST00000513881 (SNX24-003) 122845518-123008610 protein_coding
ENST00000515729 (SNX24-013) 122998269-123002142 processed_transcript
ENSG00000168938 (PPIC)
peptidylprolyl isomerase C (cyclophilin C) 		ENST00000306442 (PPIC-001) 123023250-123036741 protein_coding
ENST00000415659 (PPIC-002) 123028493-123036725 retained_intron
ENSG00000205302 (SNX2)
sorting nexin 2 		ENST00000379516 (SNX2-001) 122774996-122830108 protein_coding
ENST00000505854 (SNX2-004) 122775095-122803869 retained_intron
ENST00000505934 (SNX2-012) 122775082-122815973 protein_coding
ENST00000506847 (SNX2-009) 122816923-122829773 processed_transcript
ENST00000506874 (SNX2-003) 122775082-122775676 processed_transcript
ENST00000507321 (SNX2-007) 122827321-122829755 retained_intron
ENST00000507852 (SNX2-010) 122827434-122828046 retained_intron
ENST00000509281 (SNX2-006) 122815568-122817340 retained_intron
ENST00000510372 (SNX2-002) 122795536-122829671 processed_transcript
ENST00000511365 (SNX2-005) 122803494-122808711 retained_intron
ENST00000512394 (SNX2-013) 122775079-122817018 nonsense_mediated_decay
ENST00000514030 (SNX2-008) 122817275-122827752 retained_intron
ENST00000514949 (SNX2-011) 122775203-122829755 protein_coding
ENSG00000260686 (CTB-36H16.2)
 ENST00000565823 (CTB-36H16.2-001) 122832356-122834533 sense_overlapping
ENSG00000263432 (RN7SL689P)
RNA, 7SL, cytoplasmic 689, pseudogene 		ENST00000577215 (RN7SL689P-201) 123022487-123022783 misc_RNA
CIL_0004B0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000034484-ENSMUSG00000024535 CGP 10090 18:53176365-53390823
GeneTranscriptPositionBiotype
ENSMUSG00000024535 (Snx24)
sorting nexing 24 		ENSMUST00000025417 (Snx24-201) 53245769-53390823 protein_coding
ENSMUST00000165032 (Snx24-202) 53245662-53390823 protein_coding
ENSMUSG00000034484 (Snx2)
sorting nexin 2 		ENSMUST00000037850 (Snx2-201) 53176365-53220860 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B0_0001ENSG00000064652ENST00000261369ENST00000395451ENST00000502387ENST00000503149ENST00000506996ENST00000507364ENST00000510914ENST00000511211ENST00000511545ENST00000513613ENST00000513881ENST00000515729ENSG00000168938ENST00000306442ENST00000415659ENSG00000205302ENST00000379516ENST00000505854ENST00000505934ENST00000506847ENST00000506874ENST00000507321ENST00000507852ENST00000509281ENST00000510372ENST00000511365ENST00000512394ENST00000514030ENST00000514949ENSG00000260686ENST00000565823ENSG00000263432ENST00000577215CIL_0004B0_0002ENSMUSG00000024535ENSMUST00000025417ENSMUST00000165032ENSMUSG00000034484ENSMUST00000037850
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004B0_0001ENSG00000064652ENST00000261369ENST00000506996ENST00000513881ENST00000515729ENSG00000168938ENST00000306442ENST00000415659ENSG00000205302ENST00000379516ENST00000505854ENST00000505934ENST00000506847ENST00000510372ENST00000514030ENSG00000260686ENST00000565823ENSG00000263432ENST00000577215CIL_0004B0_0002ENSMUSG00000024535ENSMUST00000025417ENSMUST00000165032ENSMUSG00000034484ENSMUST00000037850
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064652 ENST00000261369 N/A N/A 0.533±0.00 3.904±2.61 0.741±0.00 2.483±0.00 2.213±0.00 6.925±0.00 1.413±0.53 3.059±1.64 1.322±0.00 2.166±0.26 9.961±2.19 2.380±0.29
ENST00000395451 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000502387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503149 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506996 N/A N/A N/A N/A N/A N/A N/A 2.872±0.00 N/A N/A N/A N/A N/A N/A
ENST00000507364 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513613 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513881 N/A N/A 1.317±0.00 0.992±0.00 0.683±0.00 N/A 0.635±0.00 N/A 1.235±0.00 N/A 1.331±0.00 N/A N/A 2.584±0.00
ENST00000515729 N/A N/A N/A N/A N/A 6.107±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000168938 ENST00000306442 16.947±0.00 18.060±0.00 1.246±0.00 0.654±0.00 10.463±6.51 3.528±0.00 7.674±4.78 3.249±0.00 6.574±0.69 7.519±3.99 5.545±1.16 9.602±7.00 57.740±27.14 11.559±4.60
ENST00000415659 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.411±0.00 N/A N/A N/A
ENSG00000205302 ENST00000379516 13.703±0.00 16.249±0.00 1.902±0.00 5.716±1.84 8.852±6.87 7.106±5.87 4.006±2.55 9.645±7.65 7.071±0.67 6.453±1.79 3.516±2.27 12.038±10.60 16.404±2.44 10.902±4.48
ENST00000505854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.544±0.00 N/A N/A N/A
ENST00000505934 N/A N/A 2.501±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506847 N/A 12.080±0.00 N/A 2.670±0.00 N/A 8.191±0.00 N/A 10.159±0.00 4.072±0.00 9.655±0.00 9.211±0.00 N/A N/A 12.674±0.00
ENST00000506874 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509281 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510372 8.860±0.00 11.202±0.00 N/A 2.727±1.20 10.108±0.00 10.018±0.00 5.508±0.00 8.458±0.00 3.080±0.00 7.220±1.28 8.740±0.00 4.187±1.46 11.658±7.09 12.553±0.27
ENST00000511365 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000512394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514030 N/A N/A N/A 7.773±0.00 4.677±0.00 2.583±0.00 N/A 5.369±0.00 8.861±0.00 9.183±0.00 1.868±0.00 N/A N/A N/A
ENST00000514949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000260686 ENST00000565823 0.109±0.00 1.105±0.00 0.285±0.00 1.395±0.35 0.490±0.12 0.711±0.38 0.187±0.01 1.100±0.04 0.650±0.51 0.653±0.32 0.153±0.06 1.244±0.88 0.313±0.08 0.528±0.30
ENSG00000263432 ENST00000577215 N/A N/A N/A 0.511±0.00 N/A 1.408±0.74 0.614±0.45 2.056±0.00 0.265±0.05 1.456±0.00 0.730±0.00 1.106±0.59 0.428±0.20 0.666±0.52
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024535 ENSMUST00000025417 N/A N/A N/A N/A N/A N/A 1.263±0.00 N/A 1.516±0.47 N/A 1.616±0.25 N/A 5.488±0.00 0.080±0.00
ENSMUST00000165032 3.205±1.31 3.781±0.55 10.081±0.68 4.975±1.17 2.322±1.66 5.141±0.48 2.950±0.32 4.318±0.33 3.926±0.66 5.027±0.83 5.086±0.62 3.534±1.33 6.538±2.93 0.297±0.16
ENSMUSG00000034484 ENSMUST00000037850 20.039±3.31 11.724±3.20 44.531±1.02 10.691±6.99 22.478±3.04 12.984±4.13 7.649±0.44 15.624±2.26 24.137±14.03 18.707±2.38 7.000±1.17 16.876±8.74 55.303±9.67 5.109±0.52

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