C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000065802 ASB1 9606 + 2:238426742-238452250 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264607 ASB1-001 238426824-238452250 protein_coding
  ENST00000409297 ASB1-004 238427004-238446617 protein_coding
  ENST00000438264 ASB1-005 238427029-238446651 nonsense_mediated_decay
  ENST00000463352 ASB1-002 238426742-238444375 processed_transcript
  ENST00000468122 ASB1-007 238435169-238446397 processed_transcript
  ENST00000469885 ASB1-003 238426830-238435881 processed_transcript
  ENST00000473306 ASB1-008 238450145-238452250 processed_transcript
  ENST00000481566 ASB1-009 238446384-238452213 processed_transcript
  ENST00000491653 ASB1-006 238433314-238444474 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264607ENST00000409297ENST00000438264ENST00000463352ENST00000468122ENST00000469885ENST00000473306
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264607 1.691±0.00 2.727±0.00 2.752±2.20 2.580±1.76 2.960±0.00 3.567±3.39 3.885±0.00 0.777±0.54 1.368±0.82 2.114±0.00 3.662±2.31 1.346±0.63 5.282±2.00
ENST00000409297 N/A N/A N/A N/A N/A N/A N/A N/A 6.758±0.00 N/A N/A 2.001±0.00 6.261±0.00
ENST00000438264 N/A N/A N/A N/A N/A N/A N/A 2.226±0.00 N/A 6.449±0.00 N/A 3.264±0.42 7.075±0.00
ENST00000463352 N/A N/A N/A N/A N/A N/A N/A N/A 1.719±0.00 N/A N/A N/A N/A
ENST00000468122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.539±0.00 N/A N/A
ENST00000469885 N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.240±0.00 N/A N/A N/A
ENST00000473306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.061±0.00 5.119±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UF CIL_0004UF_0002 CGP 2:238320441-238452250
CIL_0003NF CIL_0003NF_0001 CGP 2:238426742-238910543

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005515 IEA protein binding
GO:0005622 IC intracellular
GO:0016567 IEA protein ubiquitination
GO:0030539 IEA male genitalia development
GO:0035556 IEA intracellular signal transduction
GO:0042036 NAS negative regulation of cytokine biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026635 asb1 ankyrin repeat and SOCS box-containing 1 protein_coding Danio_rerio
ENSMUSG00000026311 Asb1 ankyrin repeat and SOCS box-containing 1 protein_coding Mus_musculus

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