C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003NF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000065802-ENSG00000233608 CGP 9606 2:238426742-238910543
GeneTranscriptPositionBiotype
ENSG00000065802 (ASB1)
ankyrin repeat and SOCS box containing 1 		ENST00000264607 (ASB1-001) 238426824-238452250 protein_coding
ENST00000409297 (ASB1-004) 238427004-238446617 protein_coding
ENST00000438264 (ASB1-005) 238427029-238446651 nonsense_mediated_decay
ENST00000463352 (ASB1-002) 238426742-238444375 processed_transcript
ENST00000468122 (ASB1-007) 238435169-238446397 processed_transcript
ENST00000469885 (ASB1-003) 238426830-238435881 processed_transcript
ENST00000473306 (ASB1-008) 238450145-238452250 processed_transcript
ENST00000481566 (ASB1-009) 238446384-238452213 processed_transcript
ENST00000491653 (ASB1-006) 238433314-238444474 retained_intron
ENSG00000224252 (AC113618.2)
 ENST00000416747 (AC113618.2-001) 238735263-238735547 processed_pseudogene
ENSG00000225493 (LINC01107)
long intergenic non-protein coding RNA 1107 		ENST00000446979 (LINC01107-001) 238510690-238555054 lincRNA
ENSG00000233608 (TWIST2)
twist family bHLH transcription factor 2 		ENST00000448943 (TWIST2-001) 238848032-238887252 protein_coding
ENST00000612363 (TWIST2-201) 238848032-238910543 protein_coding
ENSG00000234279 (AC113618.1)
 ENST00000448543 (AC113618.1-001) 238720324-238740780 lincRNA
ENSG00000274346 (RP11-40B20.1)
 ENST00000614692 (RP11-40B20.1-001) 238454908-238457520 unprocessed_pseudogene
CIL_0003NF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000026311-ENSMUSG00000007805 CGP 10090 1:91540544-91848028
GeneTranscriptPositionBiotype
ENSMUSG00000007805 (Twist2)
twist basic helix-loop-helix transcription factor 2 		ENSMUST00000007949 (Twist2-001) 91801461-91848028 protein_coding
ENSMUST00000186075 (Twist2-002) 91801470-91803994 protein_coding
ENSMUSG00000026311 (Asb1)
ankyrin repeat and SOCS box-containing 1 		ENSMUST00000027538 (Asb1-001) 91540714-91559589 protein_coding
ENSMUST00000086843 (Asb1-002) 91540544-91556088 protein_coding
ENSMUST00000185718 (Asb1-008) 91540567-91546951 processed_transcript
ENSMUST00000186068 (Asb1-005) 91540732-91554824 protein_coding
ENSMUST00000188081 (Asb1-007) 91541080-91552779 protein_coding
ENSMUST00000188879 (Asb1-006) 91541080-91555117 protein_coding
ENSMUST00000190484 (Asb1-004) 91540732-91554824 protein_coding
ENSMUSG00000100980 (RP23-5H15.1)
predicted gene 29100 		ENSMUST00000187564 (RP23-5H15.1-001) 91798528-91802937 antisense
ENSMUSG00000101414 (RP23-5H15.2)
predicted gene 29101 		ENSMUST00000188329 (RP23-5H15.2-001) 91822515-91823985 sense_intronic
ENSMUSG00000101705 (RP24-291E1.1)
predicted gene 28380 		ENSMUST00000188800 (RP24-291E1.1-001) 91611406-91624500 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NF_0001ENSG00000065802ENST00000264607ENST00000409297ENST00000438264ENST00000463352ENST00000468122ENST00000469885ENST00000473306ENST00000481566ENST00000491653ENSG00000224252ENST00000416747ENSG00000225493ENST00000446979ENSG00000233608ENST00000448943ENST00000612363ENSG00000234279ENST00000448543ENSG00000274346ENST00000614692CIL_0003NF_0002ENSMUSG00000007805ENSMUST00000007949ENSMUST00000186075ENSMUSG00000026311ENSMUST00000027538ENSMUST00000086843ENSMUST00000185718ENSMUST00000186068ENSMUST00000188081ENSMUST00000188879ENSMUST00000190484ENSMUSG00000100980ENSMUST00000187564ENSMUSG00000101414ENSMUST00000188329ENSMUSG00000101705ENSMUST00000188800
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003NF_0001ENSG00000065802ENST00000264607ENST00000409297ENST00000438264ENST00000463352ENST00000468122ENST00000469885ENST00000473306ENSG00000224252ENST00000416747ENSG00000225493ENST00000446979ENSG00000233608ENST00000448943ENST00000612363ENSG00000234279ENST00000448543ENSG00000274346ENST00000614692CIL_0003NF_0002ENSMUSG00000007805ENSMUST00000007949ENSMUST00000186075ENSMUSG00000026311ENSMUST00000027538ENSMUST00000086843ENSMUST00000188879ENSMUST00000190484ENSMUSG00000100980ENSMUST00000187564ENSMUSG00000101414ENSMUST00000188329ENSMUSG00000101705ENSMUST00000188800
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000065802 ENST00000264607 1.691±0.00 2.727±0.00 N/A 2.752±2.20 2.580±1.76 2.960±0.00 3.567±3.39 3.885±0.00 0.777±0.54 1.368±0.82 2.114±0.00 3.662±2.31 1.346±0.63 5.282±2.00
ENST00000409297 N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.758±0.00 N/A N/A 2.001±0.00 6.261±0.00
ENST00000438264 N/A N/A N/A N/A N/A N/A N/A N/A 2.226±0.00 N/A 6.449±0.00 N/A 3.264±0.42 7.075±0.00
ENST00000463352 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.719±0.00 N/A N/A N/A N/A
ENST00000468122 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.539±0.00 N/A N/A
ENST00000469885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.240±0.00 N/A N/A N/A
ENST00000473306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.061±0.00 5.119±0.00 N/A
ENST00000481566 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224252 ENST00000416747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00
ENSG00000225493 ENST00000446979 N/A 0.075±0.00 N/A N/A 0.036±0.02 N/A N/A N/A N/A 0.038±0.00 N/A 0.021±0.01 N/A 0.720±0.00
ENSG00000233608 ENST00000448943 N/A N/A N/A 0.013±0.00 0.593±0.00 0.212±0.00 0.076±0.00 N/A 0.096±0.05 0.375±0.00 N/A N/A N/A N/A
ENST00000612363 44.115±0.00 2.699±0.00 0.058±0.00 0.040±0.00 11.512±11.10 7.708±7.27 1.254±0.00 1.124±0.00 0.514±0.29 2.319±1.95 0.901±0.00 11.240±11.84 13.627±6.84 4.419±2.32
ENSG00000234279 ENST00000448543 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.052±0.00
ENSG00000274346 ENST00000614692 N/A 0.152±0.00 N/A N/A 0.292±0.00 N/A 0.307±0.00 N/A N/A N/A N/A 0.077±0.00 N/A 0.077±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000007805 ENSMUST00000007949 36.512±29.38 5.342±0.64 10.932±0.58 6.267±3.59 17.670±7.68 3.357±0.57 1.536±0.64 0.841±0.23 0.203±0.22 5.292±0.31 0.242±0.14 16.742±8.91 1.610±1.30 0.299±0.23
ENSMUST00000186075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A
ENSMUSG00000026311 ENSMUST00000027538 3.235±0.84 3.694±0.96 3.311±0.36 4.892±0.61 3.439±0.50 0.934±0.68 2.184±0.19 2.988±0.59 4.514±4.01 5.914±0.75 1.321±0.58 3.850±1.47 1.825±1.11 7.551±3.10
ENSMUST00000086843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.749±0.00 N/A
ENSMUST00000185718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188879 N/A 2.035±0.15 N/A N/A N/A 1.208±0.00 N/A N/A 1.373±0.55 N/A N/A 2.747±0.62 2.820±0.13 31.954±6.98
ENSMUST00000190484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.871±0.00
ENSMUSG00000100980 ENSMUST00000187564 N/A N/A N/A 0.564±0.00 0.142±0.00 N/A N/A N/A 0.011±0.00 N/A 0.022±0.01 0.049±0.02 0.025±0.00 0.025±0.01
ENSMUSG00000101414 ENSMUST00000188329 0.474±0.44 0.075±0.03 0.097±0.09 0.086±0.06 0.100±0.11 0.050±0.00 0.029±0.01 N/A 0.009±0.00 0.026±0.00 0.034±0.01 0.144±0.07 0.018±0.01 0.071±0.01
ENSMUSG00000101705 ENSMUST00000188800 N/A N/A 0.107±0.00 0.116±0.08 N/A N/A N/A N/A 0.039±0.01 N/A N/A 1.275±0.00 0.266±0.00 0.138±0.00

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