C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box-containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000026311 Asb1 10090 + 1:91540544-91559589 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000027538 Asb1-001 91540714-91559589 protein_coding
  ENSMUST00000086843 Asb1-002 91540544-91556088 protein_coding
  ENSMUST00000185718 Asb1-008 91540567-91546951 processed_transcript
  ENSMUST00000186068 Asb1-005 91540732-91554824 protein_coding
  ENSMUST00000188081 Asb1-007 91541080-91552779 protein_coding
  ENSMUST00000188879 Asb1-006 91541080-91555117 protein_coding
  ENSMUST00000190484 Asb1-004 91540732-91554824 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000027538ENSMUST00000086843ENSMUST00000188879ENSMUST00000190484
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000027538 3.235±0.84 3.694±0.96 3.311±0.36 4.892±0.61 3.439±0.50 0.934±0.68 2.184±0.19 2.988±0.59 4.514±4.01 5.914±0.75 1.321±0.58 3.850±1.47 1.825±1.11 7.551±3.10
ENSMUST00000086843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.749±0.00 N/A
ENSMUST00000188879 N/A 2.035±0.15 N/A N/A N/A 1.208±0.00 N/A N/A 1.373±0.55 N/A N/A 2.747±0.62 2.820±0.13 31.954±6.98
ENSMUST00000190484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.871±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UF CIL_0004UF_0003 CGP 1:91494647-91559589
CIL_0003NF CIL_0003NF_0002 CGP 1:91540544-91848028

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0016567 IEA protein ubiquitination
GO:0030539 IMP male genitalia development
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026635 asb1 ankyrin repeat and SOCS box-containing 1 protein_coding Danio_rerio
ENSG00000065802 ASB1 ankyrin repeat and SOCS box containing 1 protein_coding Homo_sapiens

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