C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear transcription factor Y, gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000066136 NFYC 9606 + 1:40691570-40771603 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308733 NFYC-007 40738838-40771603 protein_coding
  ENST00000372651 NFYC-006 40709543-40770940 protein_coding
  ENST00000372652 NFYC-004 40709357-40771603 protein_coding
  ENST00000372653 NFYC-003 40692013-40771106 protein_coding
  ENST00000372654 NFYC-005 40691838-40771102 protein_coding
  ENST00000372669 NFYC-012 40692290-40766687 protein_coding
  ENST00000414185 NFYC-016 40753213-40771603 protein_coding
  ENST00000416859 NFYC-025 40738836-40762961 protein_coding
  ENST00000424419 NFYC-018 40691686-40767243 retained_intron
  ENST00000425457 NFYC-015 40691716-40771139 protein_coding
  ENST00000427410 NFYC-002 40691689-40771126 protein_coding
  ENST00000440226 NFYC-011 40735315-40771093 protein_coding
  ENST00000447388 NFYC-001 40691709-40771603 protein_coding
  ENST00000453631 NFYC-010 40691717-40753246 protein_coding
  ENST00000456393 NFYC-017 40691743-40771601 protein_coding
  ENST00000467203 NFYC-013 40691648-40758448 retained_intron
  ENST00000483091 NFYC-014 40766090-40766931 processed_transcript
  ENST00000488635 NFYC-008 40768646-40771107 retained_intron
  ENST00000496608 NFYC-009 40768730-40771601 retained_intron
  ENST00000525290 NFYC-022 40738834-40758159 protein_coding
  ENST00000525349 NFYC-023 40757953-40766682 retained_intron
  ENST00000530965 NFYC-024 40738836-40753216 protein_coding
  ENST00000531464 NFYC-021 40734848-40749576 protein_coding
  ENST00000534399 NFYC-020 40692008-40747584 protein_coding
  ENST00000620728 NFYC-201 40691570-40771601 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000308733ENST00000372651ENST00000372652ENST00000372654ENST00000425457ENST00000427410ENST00000447388ENST00000453631ENST00000456393ENST00000467203ENST00000496608ENST00000525290ENST00000620728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000308733 4.619±0.00 8.370±0.00 N/A N/A 3.278±0.00 2.394±0.00 N/A N/A 3.173±0.00 2.553±0.00 N/A 2.958±0.00 5.190±0.00 5.530±0.00
ENST00000372651 N/A N/A N/A N/A N/A N/A N/A 6.481±3.65 3.341±0.00 3.658±1.01 4.342±0.00 N/A N/A N/A
ENST00000372652 N/A N/A N/A N/A 1.998±0.00 1.169±0.00 N/A N/A N/A N/A N/A 5.202±0.00 N/A N/A
ENST00000372654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.128±0.00 N/A N/A
ENST00000425457 N/A N/A N/A N/A N/A N/A N/A 2.133±0.00 2.586±0.00 N/A N/A N/A N/A N/A
ENST00000427410 N/A N/A N/A N/A 1.508±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000447388 N/A 5.242±0.00 N/A 3.567±0.00 2.071±0.97 5.645±2.55 5.656±4.76 7.165±0.00 3.566±0.03 2.190±1.38 17.685±0.00 6.453±3.03 10.993±1.65 4.390±0.00
ENST00000453631 N/A N/A N/A N/A N/A N/A N/A 6.820±0.00 N/A N/A N/A N/A N/A 25.210±0.00
ENST00000456393 5.819±0.00 5.121±0.00 N/A 8.533±0.00 3.852±0.00 3.028±0.00 5.033±0.00 5.825±0.00 1.940±0.00 N/A 11.292±0.00 6.385±0.55 4.003±0.00 7.321±1.32
ENST00000467203 N/A N/A N/A N/A 1.627±0.00 N/A 1.976±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000496608 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.444±0.00 N/A N/A N/A N/A
ENST00000525290 N/A N/A 5.552±0.00 7.681±0.00 3.506±0.00 N/A 5.184±0.00 N/A 7.790±0.00 5.103±0.00 N/A 8.792±0.00 24.296±0.00 N/A
ENST00000620728 4.566±0.00 5.215±0.00 N/A 4.641±0.00 3.510±0.00 N/A 1.100±0.00 4.459±0.00 N/A 2.407±0.00 N/A 7.930±2.05 6.228±0.00 7.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA:IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 TAS transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IDA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006457 TAS protein folding
GO:0008134 IEA transcription factor binding
GO:0016602 IEA:IDA CCAAT-binding factor complex
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 IEA transcription regulatory region DNA binding
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070151 nfyc nuclear transcription factor Y, gamma protein_coding Danio_rerio
ENSMUSG00000032897 Nfyc nuclear transcription factor-Y gamma protein_coding Mus_musculus

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