C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear transcription factor-Y gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000032897 Nfyc 10090 - 4:120757438-120831572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000043429 Nfyc-001 120757438-120825706 protein_coding
  ENSMUST00000097906 Nfyc-201 120758177-120790481 protein_coding
  ENSMUST00000118902 Nfyc-002 120757438-120831572 protein_coding
  ENSMUST00000120779 Nfyc-003 120757438-120815712 protein_coding
  ENSMUST00000127030 Nfyc-008 120757954-120762175 processed_transcript
  ENSMUST00000134979 Nfyc-006 120765257-120825684 protein_coding
  ENSMUST00000136236 Nfyc-005 120768879-120825696 protein_coding
  ENSMUST00000145029 Nfyc-009 120758197-120765433 processed_transcript
  ENSMUST00000145658 Nfyc-004 120779179-120825707 protein_coding
  ENSMUST00000148081 Nfyc-007 120761665-120768217 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000043429ENSMUST00000097906ENSMUST00000118902ENSMUST00000127030ENSMUST00000136236ENSMUST00000145029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000043429 13.494±5.72 22.676±3.44 18.980±5.02 20.484±13.11 10.601±2.21 11.501±3.89 8.396±2.27 11.280±2.63 18.845±11.70 18.184±4.74 14.185±1.53 19.784±11.93 18.788±7.26 6.997±4.66
ENSMUST00000097906 9.124±1.09 N/A N/A 13.662±9.90 11.680±4.27 N/A 15.351±2.35 10.257±0.00 13.340±6.38 N/A N/A 17.879±11.58 8.897±1.32 4.431±2.22
ENSMUST00000118902 N/A 29.015±0.74 N/A N/A 13.724±3.60 22.041±1.76 N/A 28.548±0.00 8.574±2.23 N/A N/A 34.375±15.01 N/A N/A
ENSMUST00000127030 N/A 34.064±6.91 N/A N/A 10.829±1.91 19.163±2.52 9.935±1.81 21.165±5.16 6.300±0.00 13.384±3.32 N/A 30.164±12.47 N/A 0.780±0.00
ENSMUST00000136236 N/A N/A N/A 18.889±0.00 N/A N/A N/A N/A N/A N/A N/A 25.022±0.00 34.788±5.50 6.081±0.00
ENSMUST00000145029 N/A N/A N/A N/A 21.222±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IDA DNA binding
GO:0003700 IDA sequence-specific DNA binding transcription factor activity
GO:0005515 IEA protein binding
GO:0005634 ISO nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IC transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008134 IEA transcription factor binding
GO:0016602 IEA CCAAT-binding factor complex
GO:0043565 IEA sequence-specific DNA binding
GO:0044212 IDA transcription regulatory region DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070151 nfyc nuclear transcription factor Y, gamma protein_coding Danio_rerio
ENSG00000066136 NFYC nuclear transcription factor Y, gamma protein_coding Homo_sapiens

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