C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ELOVL fatty acid elongase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000372458 ELOVL1-001 ENSG00000066322 9606 - 1:43363397-43368018 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000372458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000372458 32.932±0.00 26.687±0.00 0.887±0.00 26.225±22.02 21.778±17.97 18.254±0.00 6.263±5.21 29.273±27.42 9.275±7.92 34.081±0.00 2.092±1.23 19.396±12.93 55.655±27.38 11.395±9.85

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005B3 CIL_0005B3_0002 CGP 1:43358955-43368074

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005783 IDA endoplasmic reticulum
GO:0005789 TAS endoplasmic reticulum membrane
GO:0009922 IDA fatty acid elongase activity
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019367 IDA fatty acid elongation, saturated fatty acid
GO:0019432 TAS triglyceride biosynthetic process
GO:0030148 IMP sphingolipid biosynthetic process
GO:0030176 NAS integral component of endoplasmic reticulum membrane
GO:0034625 IDA fatty acid elongation, monounsaturated fatty acid
GO:0035338 TAS long-chain fatty-acyl-CoA biosynthetic process
GO:0042761 IDA very long-chain fatty acid biosynthetic process
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000006557 Elovl1-001 protein_coding Mus_musculus 0 1585
ENSMUST00000167636 Elovl1-201 protein_coding Mus_musculus 0 1485
ENSMUST00000067896 Elovl1-003 protein_coding Mus_musculus 0 1271
ENSMUST00000102673 Elovl1-002 protein_coding Mus_musculus 0 1171
ENSMUST00000143140 Elovl1-006 processed_transcript Mus_musculus 0 259
ENSMUST00000129419 Elovl1-005 processed_transcript Mus_musculus 0 235

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