C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class VI, type 11A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000068650 ATP11A 9606 + 13:112690329-112887168 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375630 ATP11A-201 112690329-112887168 protein_coding
  ENST00000375645 ATP11A-202 112690329-112887168 protein_coding
  ENST00000415301 ATP11A-010 112875809-112882188 protein_coding
  ENST00000418678 ATP11A-003 112785172-112860798 protein_coding
  ENST00000419448 ATP11A-013 112696831-112717675 processed_transcript
  ENST00000419631 ATP11A-004 112871768-112883958 protein_coding
  ENST00000459011 ATP11A-009 112851180-112851854 processed_transcript
  ENST00000459908 ATP11A-002 112785145-112860798 retained_intron
  ENST00000466946 ATP11A-007 112703287-112810699 processed_transcript
  ENST00000471555 ATP11A-011 112842309-112886113 nonsense_mediated_decay
  ENST00000479193 ATP11A-005 112880301-112882147 retained_intron
  ENST00000487903 ATP11A-001 112690329-112887168 protein_coding
  ENST00000489577 ATP11A-012 112836243-112855928 processed_transcript
  ENST00000493489 ATP11A-006 112873503-112878459 retained_intron
  ENST00000495930 ATP11A-008 112873432-112876094 retained_intron
  ENST00000610419 ATP11A-014 112855921-112856805 protein_coding
  ENST00000614170 ATP11A-015 112880972-112884513 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375630ENST00000375645ENST00000419448ENST00000419631ENST00000471555ENST00000487903ENST00000614170
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375630 3.746±0.00 0.587±0.00 N/A 1.283±0.00 0.785±0.00 2.128±0.00 3.078±0.00 3.258±0.00 0.966±0.00 9.558±3.77 2.048±0.00 3.467±2.42 2.022±1.05 2.093±0.71
ENST00000375645 1.172±0.00 1.671±0.00 N/A 3.687±0.00 0.611±0.00 N/A 1.945±0.00 N/A 1.247±0.00 N/A 1.247±0.00 0.867±0.00 0.649±0.00 N/A
ENST00000419448 N/A 0.087±0.00 0.282±0.00 0.090±0.00 0.737±0.00 N/A 0.107±0.00 N/A N/A 0.462±0.00 N/A 0.143±0.06 N/A 0.080±0.00
ENST00000419631 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 30.587±0.00 7.233±0.00 6.611±0.00
ENST00000471555 N/A N/A 2.370±0.00 N/A 1.055±0.00 N/A 1.636±1.04 1.010±0.00 0.454±0.00 3.652±0.00 1.220±0.23 4.622±0.00 0.929±0.00 1.324±0.00
ENST00000487903 N/A N/A 0.988±0.00 2.017±0.00 N/A 1.106±0.00 4.038±0.00 N/A N/A N/A N/A 0.662±0.00 0.644±0.00 N/A
ENST00000614170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.469±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014E CIL_00014E_0001 CGP 13:112690329-113099739

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005765 IDA lysosomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055037 IDA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008413 atp11a ATPase, class VI, type 11A protein_coding Danio_rerio
ENSMUSG00000031441 Atp11a ATPase, class VI, type 11A protein_coding Mus_musculus

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