C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000375645 ATP11A-202 ENSG00000068650 9606 + 13:112690329-112887168 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartLiverMuscleOvaryPlacentaENST00000375645
Transcript ID Adipose Adrenal Brain Breast Heart Liver Muscle Ovary Placenta
ENST00000375645 1.172±0.00 1.671±0.00 3.687±0.00 0.611±0.00 1.945±0.00 1.247±0.00 1.247±0.00 0.867±0.00 0.649±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00014E CIL_00014E_0001 CGP 13:112690329-113099739

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005765 IDA lysosomal membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 NAS phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0055037 IDA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091237 Atp11a-002 protein_coding Mus_musculus 0 3336
ENSMUST00000033818 Atp11a-001 protein_coding Mus_musculus 0 3336
ENSMUST00000133338 Atp11a-004 nonsense_mediated_decay Mus_musculus 0 2401
ENSMUST00000132974 Atp11a-003 protein_coding Mus_musculus 0 1797
ENSDART00000145117 atp11a-001 protein_coding Danio_rerio 0 1674
ENSDART00000040284 atp11a-201 protein_coding Danio_rerio 0 1646
ENSDART00000150029 atp11a-003 protein_coding Danio_rerio 0 1550
ENSMUST00000152273 Atp11a-008 protein_coding Mus_musculus 0 488
ENSMUST00000136918 Atp11a-007 processed_transcript Mus_musculus 0 222
ENSDART00000114515 atp8b2-201 protein_coding Danio_rerio 3e-16 94
ENSDART00000140475 atp8b2-001 protein_coding Danio_rerio 3e-16 94

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