C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class VI, type 11A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000031441 Atp11a 10090 + 8:12757014-12868728 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000033818 Atp11a-001 12757014-12868728 protein_coding
  ENSMUST00000091237 Atp11a-002 12757016-12868728 protein_coding
  ENSMUST00000125031 Atp11a-005 12811416-12814383 retained_intron
  ENSMUST00000127197 Atp11a-006 12822400-12828537 retained_intron
  ENSMUST00000131804 Atp11a-009 12857962-12862202 protein_coding
  ENSMUST00000132974 Atp11a-003 12835165-12868667 protein_coding
  ENSMUST00000133338 Atp11a-004 12757069-12859720 nonsense_mediated_decay
  ENSMUST00000136918 Atp11a-007 12849841-12851724 processed_transcript
  ENSMUST00000139545 Atp11a-011 12861565-12865570 retained_intron
  ENSMUST00000143359 Atp11a-010 12856960-12862205 protein_coding
  ENSMUST00000152273 Atp11a-008 12847855-12857270 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000033818ENSMUST00000091237ENSMUST00000132974ENSMUST00000133338ENSMUST00000143359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000033818 12.506±6.01 8.956±1.36 9.088±1.58 2.724±0.00 5.964±0.55 4.069±1.37 8.052±1.92 17.130±7.50 0.531±0.17 39.774±2.94 5.973±1.02 9.744±2.76 20.519±19.14 N/A
ENSMUST00000091237 N/A N/A N/A 3.987±0.30 N/A N/A 2.170±0.00 5.760±0.55 0.389±0.10 N/A N/A 4.783±0.50 14.457±7.43 4.328±0.95
ENSMUST00000132974 17.325±10.53 28.626±15.93 9.390±1.28 6.427±0.06 6.351±0.84 11.209±8.61 8.422±2.30 56.651±23.01 0.735±0.24 76.343±17.38 N/A 19.964±10.67 13.264±0.95 4.673±1.36
ENSMUST00000133338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.127±0.27
ENSMUST00000143359 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 27.331±5.54

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SC CIL_0008SC_0002 VISTA 8:12162372-12763356
CIL_00014E CIL_00014E_0002 CGP 8:12757014-13020905

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0055037 IEA recycling endosome
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008413 atp11a ATPase, class VI, type 11A protein_coding Danio_rerio
ENSG00000068650 ATP11A ATPase, class VI, type 11A protein_coding Homo_sapiens

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