C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleobindin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070081 NUCB2 9606 + 11:17208153-17349974 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000323688 NUCB2-004 17276741-17331390 protein_coding
  ENST00000458064 NUCB2-201 17295322-17331523 protein_coding
  ENST00000525637 NUCB2-018 17276731-17282870 processed_transcript
  ENST00000526120 NUCB2-007 17269198-17296166 protein_coding
  ENST00000527580 NUCB2-014 17310920-17331525 protein_coding
  ENST00000527735 NUCB2-015 17312081-17331516 protein_coding
  ENST00000528644 NUCB2-009 17208153-17295424 protein_coding
  ENST00000529010 NUCB2-005 17276765-17332211 protein_coding
  ENST00000529313 NUCB2-016 17276984-17310927 protein_coding
  ENST00000530527 NUCB2-002 17260356-17310937 protein_coding
  ENST00000530964 NUCB2-010 17276831-17295425 protein_coding
  ENST00000531172 NUCB2-012 17276734-17295441 protein_coding
  ENST00000531242 NUCB2-013 17311839-17331522 retained_intron
  ENST00000532240 NUCB2-008 17332042-17349974 processed_transcript
  ENST00000533511 NUCB2-011 17276741-17295604 retained_intron
  ENST00000533738 NUCB2-006 17276741-17296166 protein_coding
  ENST00000533773 NUCB2-020 17276011-17331524 nonsense_mediated_decay
  ENST00000533926 NUCB2-017 17277023-17301761 protein_coding
  ENST00000620945 NUCB2-019 17260537-17275913 processed_transcript
  ENST00000622082 NUCB2-202 17295322-17331523 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323688ENST00000458064ENST00000525637ENST00000527580ENST00000529010ENST00000529313ENST00000531242ENST00000532240ENST00000533926ENST00000622082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323688 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.980±0.00 N/A N/A N/A N/A
ENST00000458064 N/A N/A 0.570±0.00 N/A 1.727±0.00 N/A 1.049±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000525637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.986±0.00 N/A N/A N/A
ENST00000527580 N/A N/A N/A 4.383±0.00 11.401±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529010 N/A N/A 0.710±0.00 1.417±0.22 2.062±0.00 1.448±0.00 2.424±0.36 N/A 2.851±0.00 4.185±0.00 1.069±0.00 3.927±2.91 N/A N/A
ENST00000529313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A N/A
ENST00000531242 13.438±0.00 18.842±0.00 N/A N/A N/A 21.710±0.00 N/A 24.869±0.00 36.642±0.00 N/A N/A 16.115±2.86 N/A 50.754±0.00
ENST00000532240 N/A N/A 0.666±0.00 1.252±0.03 N/A 1.416±0.00 N/A N/A 1.476±0.00 2.287±0.00 0.452±0.12 0.903±0.00 N/A N/A
ENST00000533926 N/A N/A 5.799±0.00 N/A N/A 7.306±0.00 N/A 17.159±0.00 N/A 13.729±0.00 3.398±0.00 8.291±0.00 N/A N/A
ENST00000622082 16.471±0.00 24.262±0.00 N/A 4.803±2.72 8.808±5.11 13.056±10.83 16.168±0.00 13.501±7.67 25.009±22.52 33.007±0.00 2.704±2.47 18.926±10.76 53.002±35.39 77.160±31.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZV CIL_0003ZV_0001 CGP 11:17077730-17349974

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005634 IEA nucleus
GO:0005640 IEA nuclear outer membrane
GO:0005737 IEA cytoplasm
GO:0005783 IEA endoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036291 nucb2b nucleobindin 2b protein_coding Danio_rerio
ENSDARG00000036299 nucb2a nucleobindin 2a protein_coding Danio_rerio
ENSMUSG00000030659 Nucb2 nucleobindin 2 protein_coding Mus_musculus

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