C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZV_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000011405-ENSG00000070081 CGP 9606 11:17077730-17349974
GeneTranscriptPositionBiotype
ENSG00000011405 (PIK3C2A)
phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 		ENST00000265970 (PIK3C2A-001) 17086572-17169741 protein_coding
ENST00000503729 (PIK3C2A-004) 17194394-17207983 processed_transcript
ENST00000531428 (PIK3C2A-003) 17077730-17207920 processed_transcript
ENST00000532035 (PIK3C2A-005) 17169352-17207950 protein_coding
ENST00000533645 (PIK3C2A-002) 17141322-17207947 nonsense_mediated_decay
ENSG00000070081 (NUCB2)
nucleobindin 2 		ENST00000323688 (NUCB2-004) 17276741-17331390 protein_coding
ENST00000458064 (NUCB2-201) 17295322-17331523 protein_coding
ENST00000525637 (NUCB2-018) 17276731-17282870 processed_transcript
ENST00000526120 (NUCB2-007) 17269198-17296166 protein_coding
ENST00000527580 (NUCB2-014) 17310920-17331525 protein_coding
ENST00000527735 (NUCB2-015) 17312081-17331516 protein_coding
ENST00000528644 (NUCB2-009) 17208153-17295424 protein_coding
ENST00000529010 (NUCB2-005) 17276765-17332211 protein_coding
ENST00000529313 (NUCB2-016) 17276984-17310927 protein_coding
ENST00000530527 (NUCB2-002) 17260356-17310937 protein_coding
ENST00000530964 (NUCB2-010) 17276831-17295425 protein_coding
ENST00000531172 (NUCB2-012) 17276734-17295441 protein_coding
ENST00000531242 (NUCB2-013) 17311839-17331522 retained_intron
ENST00000532240 (NUCB2-008) 17332042-17349974 processed_transcript
ENST00000533511 (NUCB2-011) 17276741-17295604 retained_intron
ENST00000533738 (NUCB2-006) 17276741-17296166 protein_coding
ENST00000533773 (NUCB2-020) 17276011-17331524 nonsense_mediated_decay
ENST00000533926 (NUCB2-017) 17277023-17301761 protein_coding
ENST00000620945 (NUCB2-019) 17260537-17275913 processed_transcript
ENST00000622082 (NUCB2-202) 17295322-17331523 protein_coding
ENSG00000110700 (RPS13)
ribosomal protein S13 		ENST00000228140 (RPS13-010) 17074389-17077666 protein_coding
ENST00000525634 (RPS13-001) 17074389-17077787 protein_coding
ENST00000525828 (RPS13-005) 17074393-17077668 retained_intron
ENST00000526895 (RPS13-002) 17074389-17077706 processed_transcript
ENST00000527571 (RPS13-006) 17076709-17077667 retained_intron
ENST00000528074 (RPS13-004) 17076955-17077678 retained_intron
ENST00000531008 (RPS13-009) 17074389-17075612 retained_intron
ENST00000531908 (RPS13-008) 17074389-17076020 retained_intron
ENST00000533969 (RPS13-007) 17075531-17077647 protein_coding
ENST00000534329 (RPS13-003) 17076825-17077715 retained_intron
ENSG00000197149 (RP11-452G18.2)
 ENST00000494359 (RP11-452G18.2-001) 17228279-17229151 processed_pseudogene
ENSG00000213779 (RP11-452G18.1)
 ENST00000496042 (RP11-452G18.1-001) 17193489-17194308 processed_pseudogene
ENSG00000240808 (CTD-3236F5.1)
 ENST00000477436 (CTD-3236F5.1-001) 17137976-17138265 processed_pseudogene
CIL_0003ZV_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030660-ENSMUSG00000030659 CGP 10090 7:116337276-116540554
GeneTranscriptPositionBiotype
ENSMUSG00000030659 (Nucb2)
nucleobindin 2 		ENSMUST00000032895 (Nucb2-001) 116504369-116540554 protein_coding
ENSMUST00000182767 (Nucb2-003) 116504384-116509601 processed_transcript
ENSMUST00000183175 (Nucb2-002) 116504415-116540443 protein_coding
ENSMUST00000183335 (Nucb2-004) 116528812-116536033 nonsense_mediated_decay
ENSMUSG00000030660 (Pik3c2a)
phosphatidylinositol 3-kinase, C2 domain containing, alpha polypeptide 		ENSMUST00000170430 (Pik3c2a-201) 116337276-116443458 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZV_0001ENSG00000011405ENST00000265970ENSG00000070081ENST00000323688ENST00000458064ENST00000525637ENST00000527580ENST00000529010ENST00000529313ENST00000531242ENST00000532240ENST00000533926ENST00000622082ENSG00000110700ENST00000228140ENST00000525634ENST00000526895ENSG00000197149ENST00000494359ENSG00000213779ENST00000496042ENSG00000240808ENST00000477436CIL_0003ZV_0002ENSMUSG00000030659ENSMUST00000032895ENSMUST00000182767ENSMUST00000183175ENSMUST00000183335ENSMUSG00000030660ENSMUST00000170430
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000011405 ENST00000265970 5.904±0.00 7.083±0.00 N/A 6.072±0.00 4.875±0.00 5.051±0.00 5.327±0.00 9.600±0.00 3.049±0.00 7.780±0.00 0.995±0.00 5.127±0.05 3.587±0.00 7.693±0.18
ENST00000503729 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532035 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000070081 ENST00000323688 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.980±0.00 N/A N/A N/A N/A
ENST00000458064 N/A N/A 0.570±0.00 N/A 1.727±0.00 N/A 1.049±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000525637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.986±0.00 N/A N/A N/A
ENST00000526120 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527580 N/A N/A N/A 4.383±0.00 11.401±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528644 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000529010 N/A N/A 0.710±0.00 1.417±0.22 2.062±0.00 1.448±0.00 2.424±0.36 N/A 2.851±0.00 4.185±0.00 1.069±0.00 3.927±2.91 N/A N/A
ENST00000529313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A N/A
ENST00000530527 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530964 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531242 13.438±0.00 18.842±0.00 N/A N/A N/A 21.710±0.00 N/A 24.869±0.00 36.642±0.00 N/A N/A 16.115±2.86 N/A 50.754±0.00
ENST00000532240 N/A N/A 0.666±0.00 1.252±0.03 N/A 1.416±0.00 N/A N/A 1.476±0.00 2.287±0.00 0.452±0.12 0.903±0.00 N/A N/A
ENST00000533511 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533926 N/A N/A 5.799±0.00 N/A N/A 7.306±0.00 N/A 17.159±0.00 N/A 13.729±0.00 3.398±0.00 8.291±0.00 N/A N/A
ENST00000620945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622082 16.471±0.00 24.262±0.00 N/A 4.803±2.72 8.808±5.11 13.056±10.83 16.168±0.00 13.501±7.67 25.009±22.52 33.007±0.00 2.704±2.47 18.926±10.76 53.002±35.39 77.160±31.08
ENSG00000110700 ENST00000228140 198.132±0.00 272.482±0.00 N/A 106.411±0.00 197.760±0.00 278.828±0.00 N/A 103.716±0.00 N/A N/A N/A 168.986±0.00 N/A 183.460±0.00
ENST00000525634 158.529±0.00 190.486±0.00 N/A 45.730±20.38 104.579±44.67 168.662±109.47 118.218±94.04 135.731±91.03 165.739±83.47 320.043±264.54 310.815±233.65 316.884±303.86 433.968±216.25 116.140±53.06
ENST00000525828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526895 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 373.077±77.68 275.713±46.40 N/A
ENST00000527571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528074 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000534329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000197149 ENST00000494359 0.351±0.00 1.704±0.00 0.421±0.00 0.033±0.00 0.158±0.00 0.186±0.02 0.140±0.05 0.244±0.00 0.103±0.00 0.200±0.00 1.583±0.00 0.303±0.19 0.089±0.01 0.622±0.27
ENSG00000213779 ENST00000496042 0.166±0.00 N/A N/A 0.049±0.00 0.190±0.00 0.265±0.05 0.041±0.00 0.182±0.00 N/A N/A 0.195±0.00 0.073±0.01 N/A 0.121±0.00
ENSG00000240808 ENST00000477436 0.324±0.00 1.089±0.00 5.344±0.00 0.228±0.04 1.452±1.17 2.276±2.23 0.631±0.33 3.996±3.49 0.675±0.42 1.567±1.44 0.213±0.00 0.727±0.70 0.659±0.00 1.327±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030659 ENSMUST00000032895 3.151±0.56 0.711±0.15 11.336±0.14 11.934±11.65 2.665±0.58 1.244±0.80 1.080±0.20 1.899±0.40 1.391±0.86 6.920±1.46 1.122±0.13 11.135±15.13 79.503±82.72 17.241±25.99
ENSMUST00000182767 N/A 0.254±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183175 N/A 0.602±0.00 N/A N/A N/A 0.527±0.30 N/A N/A 0.157±0.00 N/A N/A 2.025±0.00 N/A N/A
ENSMUST00000183335 N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030660 ENSMUST00000170430 3.426±1.15 1.227±0.44 3.098±1.11 2.624±1.20 2.144±1.47 2.164±0.75 1.118±0.19 3.726±0.38 1.707±0.26 3.671±0.65 0.478±0.20 3.087±1.61 6.180±2.31 1.948±0.99

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