C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nucleobindin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000030659 Nucb2 10090 + 7:116504369-116540554 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000032895 Nucb2-001 116504369-116540554 protein_coding
  ENSMUST00000182767 Nucb2-003 116504384-116509601 processed_transcript
  ENSMUST00000183175 Nucb2-002 116504415-116540443 protein_coding
  ENSMUST00000183335 Nucb2-004 116528812-116536033 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000032895ENSMUST00000182767ENSMUST00000183175ENSMUST00000183335
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000032895 3.151±0.56 0.711±0.15 11.336±0.14 11.934±11.65 2.665±0.58 1.244±0.80 1.080±0.20 1.899±0.40 1.391±0.86 6.920±1.46 1.122±0.13 11.135±15.13 79.503±82.72 17.241±25.99
ENSMUST00000182767 N/A 0.254±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183175 N/A 0.602±0.00 N/A N/A N/A 0.527±0.30 N/A N/A 0.157±0.00 N/A N/A 2.025±0.00 N/A N/A
ENSMUST00000183335 N/A N/A N/A N/A N/A 0.425±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZV CIL_0003ZV_0002 CGP 7:116337276-116540554
CIL_0008RM CIL_0008RM_0002 VISTA 7:116387002-116987715

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005509 IDA calcium ion binding
GO:0005634 IDA nucleus
GO:0005640 IDA nuclear outer membrane
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0006874 TAS cellular calcium ion homeostasis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000036291 nucb2b nucleobindin 2b protein_coding Danio_rerio
ENSDARG00000036299 nucb2a nucleobindin 2a protein_coding Danio_rerio
ENSG00000070081 NUCB2 nucleobindin 2 protein_coding Homo_sapiens

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