C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070614 NDST1 9606 + 5:150485818-150558211 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000261797 NDST1-002 150508112-150558211 protein_coding
  ENST00000518299 NDST1-004 150497927-150521323 protein_coding
  ENST00000518346 NDST1-010 150507640-150521102 processed_transcript
  ENST00000519157 NDST1-008 150486294-150521731 protein_coding
  ENST00000521752 NDST1-006 150552561-150553711 processed_transcript
  ENST00000522491 NDST1-007 150485818-150521458 protein_coding
  ENST00000523767 NDST1-001 150497778-150553714 protein_coding
  ENST00000524161 NDST1-009 150486331-150521227 processed_transcript
  ENST00000624156 NDST1-005 150550414-150550899 TEC

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000261797ENST00000523767ENST00000624156
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000261797 N/A N/A 2.273±0.00 N/A 14.667±0.00 N/A 4.926±4.55 N/A N/A N/A 15.609±12.45 N/A N/A
ENST00000523767 N/A N/A N/A N/A N/A N/A 0.494±0.00 2.881±0.00 N/A N/A N/A N/A N/A
ENST00000624156 0.072±0.00 0.304±0.00 0.281±0.00 0.291±0.00 0.542±0.21 0.838±0.00 0.105±0.00 0.280±0.00 0.105±0.04 0.363±0.00 0.346±0.27 0.111±0.02 0.189±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670
CIL_0003JB CIL_0003JB_0002 CGP 5:150443190-150558211

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000165 IEA MAPK cascade
GO:0000271 IEA polysaccharide biosynthetic process
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0006954 IEA inflammatory response
GO:0007224 IEA smoothened signaling pathway
GO:0007585 IEA respiratory gaseous exchange
GO:0008146 IEA sulfotransferase activity
GO:0008152 IEA metabolic process
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0009887 IEA organ morphogenesis
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0019213 IEA deacetylase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030210 IEA heparin biosynthetic process
GO:0030900 IEA forebrain development
GO:0030901 IEA midbrain development
GO:0044281 TAS small molecule metabolic process
GO:0048702 IEA embryonic neurocranium morphogenesis
GO:0048703 IEA embryonic viscerocranium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062397 CU468924.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000074936 NDST1 (2 of 2) N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein_coding Danio_rerio
ENSMUSG00000054008 Ndst1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein_coding Mus_musculus

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