C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000054008 Ndst1 10090 - 18:60685978-60713389 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000169273 Ndst1-201 60685978-60713389 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169273
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169273 6.335±2.99 23.805±6.59 21.338±0.00 10.196±3.49 9.920±2.77 4.123±0.43 11.949±0.41 10.073±2.29 34.189±7.24 2.277±0.45 26.032±8.41 4.255±3.01 1.011±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0002 VISTA 18:60604549-61207221

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000165 IMP MAPK cascade
GO:0000271 IMP polysaccharide biosynthetic process
GO:0005794 IEA Golgi apparatus
GO:0006476 TAS protein deacetylation
GO:0006477 TAS protein sulfation
GO:0006954 IEA inflammatory response
GO:0007224 IGI smoothened signaling pathway
GO:0007585 IMP respiratory gaseous exchange
GO:0008146 IDA sulfotransferase activity
GO:0008543 IMP fibroblast growth factor receptor signaling pathway
GO:0009887 IMP organ morphogenesis
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 TAS [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0019213 IDA deacetylase activity
GO:0030203 IMP glycosaminoglycan metabolic process
GO:0030210 IEA heparin biosynthetic process
GO:0030900 IGI forebrain development
GO:0030901 IGI midbrain development
GO:0048702 IMP embryonic neurocranium morphogenesis
GO:0048703 IMP embryonic viscerocranium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000062397 CU468924.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000074936 NDST1 (2 of 2) N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein_coding Danio_rerio
ENSG00000070614 NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 protein_coding Homo_sapiens

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