C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000261797 NDST1-002 ENSG00000070614 9606 + 5:150508112-150558211 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastHeartOvaryENST00000261797
Transcript ID Bladder Breast Heart Ovary
ENST00000261797 2.273±0.00 14.667±0.00 4.926±4.55 15.609±12.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670
CIL_0003JB CIL_0003JB_0002 CGP 5:150443190-150558211

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0000165 IEA MAPK cascade
GO:0000271 IEA polysaccharide biosynthetic process
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0006954 IEA inflammatory response
GO:0007224 IEA smoothened signaling pathway
GO:0007585 IEA respiratory gaseous exchange
GO:0008146 IEA sulfotransferase activity
GO:0008543 IEA fibroblast growth factor receptor signaling pathway
GO:0009887 IEA organ morphogenesis
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0015016 IEA [heparan sulfate]-glucosamine N-sulfotransferase activity
GO:0016021 IEA integral component of membrane
GO:0016787 IEA hydrolase activity
GO:0019213 IEA deacetylase activity
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030210 IEA heparin biosynthetic process
GO:0030900 IEA forebrain development
GO:0030901 IEA midbrain development
GO:0044281 TAS small molecule metabolic process
GO:0048702 IEA embryonic neurocranium morphogenesis
GO:0048703 IEA embryonic viscerocranium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000169273 Ndst1-201 protein_coding Mus_musculus 0 4000
ENSDART00000085748 NDST1 (2 of 2)-201 protein_coding Danio_rerio 0 435

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