C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: casein kinase 2, alpha prime polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000070770 CSNK2A2 9606 - 16:58157907-58197920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262506 CSNK2A2-001 58157907-58197920 protein_coding
  ENST00000562367 CSNK2A2-004 58174018-58196773 retained_intron
  ENST00000563307 CSNK2A2-002 58159551-58167713 protein_coding
  ENST00000565188 CSNK2A2-006 58174475-58197878 protein_coding
  ENST00000566813 CSNK2A2-003 58157907-58192886 processed_transcript
  ENST00000567730 CSNK2A2-005 58158117-58186856 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262506ENST00000563307ENST00000567730
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262506 12.276±0.00 5.760±0.00 1.278±0.00 4.785±3.43 12.866±0.00 13.404±11.85 7.677±0.00 10.265±0.00 4.361±0.00 7.961±6.65 21.734±0.00 12.726±6.27 10.032±1.45 106.595±32.95
ENST00000563307 6.156±0.00 8.167±0.00 1.250±0.00 3.659±1.02 4.871±3.46 3.692±1.35 1.461±0.85 4.637±0.53 2.699±1.07 3.416±1.89 1.927±0.00 7.465±3.02 5.297±1.27 9.054±1.21
ENST00000567730 N/A N/A N/A N/A 5.525±0.00 6.119±3.56 4.831±0.00 N/A N/A N/A N/A N/A N/A 30.459±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Z0 CIL_0008Z0_0001 VISTA 16:57818949-58421282
CIL_0004RW CIL_0004RW_0001 CGP 16:58113588-58197920
CIL_00052F CIL_00052F_0002 CGP 16:58157907-58283836

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000278 TAS mitotic cell cycle
GO:0004672 IEA protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0006915 IEA apoptotic process
GO:0007411 TAS axon guidance
GO:0016055 IEA Wnt signaling pathway
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0031519 IDA PcG protein complex
GO:0047485 IPI protein N-terminus binding
GO:0051726 IEA regulation of cell cycle
GO:0071174 IMP mitotic spindle checkpoint

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000012818 ck2a2a casein kinase 2 alpha 2a protein_coding Danio_rerio
ENSDARG00000013582 ck2a2b casein kinase 2 alpha 2b protein_coding Danio_rerio
ENSMUSG00000046707 Csnk2a2 casein kinase 2, alpha prime polypeptide protein_coding Mus_musculus

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