C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004RW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000070761-ENSG00000070770 CGP 9606 16:58113588-58197920
GeneTranscriptPositionBiotype
ENSG00000070761 (CFAP20)
cilia and flagella associated protein 20 		ENST00000262498 (CFAP20-001) 58113588-58129450 protein_coding
ENST00000562443 (CFAP20-006) 58114962-58115450 processed_transcript
ENST00000562622 (CFAP20-002) 58113606-58129371 retained_intron
ENST00000564150 (CFAP20-005) 58113960-58115567 retained_intron
ENST00000565880 (CFAP20-007) 58115401-58129361 protein_coding
ENST00000567092 (CFAP20-004) 58115792-58129300 retained_intron
ENST00000567660 (CFAP20-003) 58116558-58129368 retained_intron
ENSG00000070770 (CSNK2A2)
casein kinase 2, alpha prime polypeptide 		ENST00000262506 (CSNK2A2-001) 58157907-58197920 protein_coding
ENST00000562367 (CSNK2A2-004) 58174018-58196773 retained_intron
ENST00000563307 (CSNK2A2-002) 58159551-58167713 protein_coding
ENST00000565188 (CSNK2A2-006) 58174475-58197878 protein_coding
ENST00000566813 (CSNK2A2-003) 58157907-58192886 processed_transcript
ENST00000567730 (CSNK2A2-005) 58158117-58186856 protein_coding
ENSG00000260867 (RP11-459F6.1)
 ENST00000561923 (RP11-459F6.1-001) 58197112-58217805 antisense
ENSG00000260927 (RP11-459F6.3)
 ENST00000569580 (RP11-459F6.3-001) 58129529-58159133 antisense
CIL_0004RW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031796-ENSMUSG00000046707 CGP 10090 8:95420252-95488820
GeneTranscriptPositionBiotype
ENSMUSG00000031796 (Gtl3)
cilia and flagella associated protein 20 		ENSMUST00000034249 (Gtl3-201) 95420252-95434869 protein_coding
ENSMUSG00000046707 (Csnk2a2)
casein kinase 2, alpha prime polypeptide 		ENSMUST00000056919 (Csnk2a2-201) 95446096-95488820 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RW_0001ENSG00000070761ENST00000262498ENST00000562443ENST00000562622ENST00000564150ENST00000565880ENST00000567092ENST00000567660ENSG00000070770ENST00000262506ENST00000562367ENST00000563307ENST00000565188ENST00000566813ENST00000567730ENSG00000260867ENST00000561923ENSG00000260927ENST00000569580CIL_0004RW_0002ENSMUSG00000031796ENSMUST00000034249ENSMUSG00000046707ENSMUST00000056919
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004RW_0001ENSG00000070761ENST00000262498ENST00000562622ENST00000564150ENST00000565880ENST00000567660ENSG00000070770ENST00000262506ENST00000563307ENST00000567730ENSG00000260867ENST00000561923ENSG00000260927ENST00000569580CIL_0004RW_0002ENSMUSG00000031796ENSMUST00000034249ENSMUSG00000046707ENSMUST00000056919
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000070761 ENST00000262498 5.676±0.00 9.794±0.00 1.931±0.00 14.652±1.19 4.153±1.86 4.931±2.95 7.391±4.05 7.998±2.82 5.980±2.39 7.119±4.94 2.427±0.51 15.885±6.71 24.129±8.13 20.033±3.68
ENST00000562443 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562622 N/A N/A N/A N/A 1.775±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564150 N/A N/A N/A N/A 5.425±0.00 N/A N/A N/A N/A 4.795±0.00 N/A 48.257±0.00 84.175±0.00 83.169±0.00
ENST00000565880 N/A N/A 4.192±0.00 N/A 1.893±0.00 5.517±0.00 2.112±0.00 N/A 5.484±0.00 5.858±0.00 2.623±0.00 7.059±0.00 N/A N/A
ENST00000567092 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567660 N/A N/A N/A N/A N/A N/A N/A 4.052±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000070770 ENST00000262506 12.276±0.00 5.760±0.00 1.278±0.00 4.785±3.43 12.866±0.00 13.404±11.85 7.677±0.00 10.265±0.00 4.361±0.00 7.961±6.65 21.734±0.00 12.726±6.27 10.032±1.45 106.595±32.95
ENST00000562367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563307 6.156±0.00 8.167±0.00 1.250±0.00 3.659±1.02 4.871±3.46 3.692±1.35 1.461±0.85 4.637±0.53 2.699±1.07 3.416±1.89 1.927±0.00 7.465±3.02 5.297±1.27 9.054±1.21
ENST00000565188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567730 N/A N/A N/A N/A 5.525±0.00 6.119±3.56 4.831±0.00 N/A N/A N/A N/A N/A N/A 30.459±0.00
ENSG00000260867 ENST00000561923 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.24
ENSG00000260927 ENST00000569580 0.053±0.00 N/A N/A 0.438±0.00 0.029±0.00 0.027±0.00 0.131±0.00 0.086±0.00 0.132±0.11 N/A N/A 0.080±0.01 0.201±0.07 1.030±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031796 ENSMUST00000034249 20.656±6.51 24.676±10.83 27.618±6.48 29.931±15.37 12.332±4.08 15.654±3.97 10.304±1.14 15.939±2.00 16.640±5.18 29.190±2.51 2.680±0.59 31.383±10.72 30.539±10.19 39.090±12.86
ENSMUSG00000046707 ENSMUST00000056919 1.666±0.93 0.803±0.04 2.548±0.24 2.469±0.27 1.810±1.23 1.178±0.26 1.471±0.14 2.307±0.23 0.972±0.41 1.568±0.20 1.267±0.38 2.179±1.34 4.843±3.16 4.051±1.00

Loading