C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: vasohibin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000071246 VASH1 9606 + 14:76762189-76783015 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000167106 VASH1-001 76762189-76783015 protein_coding
  ENST00000553518 VASH1-005 76769953-76773913 processed_transcript
  ENST00000554237 VASH1-002 76762329-76773650 protein_coding
  ENST00000554743 VASH1-003 76778006-76779975 protein_coding
  ENST00000556038 VASH1-006 76769881-76777999 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000167106ENST00000554237ENST00000556038
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000167106 3.402±0.00 2.310±0.00 0.315±0.00 2.788±1.99 3.164±2.19 1.648±0.00 1.657±1.31 0.763±0.62 0.732±0.20 1.746±0.85 N/A 3.597±2.72 8.827±4.61 3.988±0.79
ENST00000554237 N/A N/A 0.459±0.00 1.727±0.00 3.285±0.00 0.429±0.00 N/A N/A 2.185±0.00 N/A 0.203±0.00 N/A N/A N/A
ENST00000556038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.095±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003P4 CIL_0003P4_0001 CGP 14:76310614-76783015
CIL_0007VF CIL_0007VF_0001 VISTA 14:76618298-77221354
CIL_0008WP CIL_0008WP_0001 VISTA 14:76629854-77233554
CIL_000867 CIL_000867_0001 VISTA 14:76636452-77239164
CIL_0007VT CIL_0007VT_0001 VISTA 14:76740528-77345010
CIL_0003P3 CIL_0003P3_0001 CGP 14:76762189-76826246

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001525 IDA angiogenesis
GO:0001937 IDA negative regulation of endothelial cell proliferation
GO:0005615 IDA extracellular space
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0007050 IEA cell cycle arrest
GO:0009611 IDA response to wounding
GO:0010596 IGI negative regulation of endothelial cell migration
GO:0016525 IDA negative regulation of angiogenesis
GO:0043537 IDA negative regulation of blood vessel endothelial cell migration
GO:0045177 IDA apical part of cell
GO:1901491 IGI negative regulation of lymphangiogenesis
GO:2000772 IMP regulation of cellular senescence

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000092716 VASH1 vasohibin 1 protein_coding Danio_rerio
ENSMUSG00000021256 Vash1 vasohibin 1 protein_coding Mus_musculus

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