C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latrophilin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072071 LPHN1 9606 - 19:14147743-14206187 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340736 LPHN1-001 14147743-14206187 protein_coding
  ENST00000361434 LPHN1-002 14149953-14206169 protein_coding
  ENST00000588677 LPHN1-008 14159489-14160580 retained_intron
  ENST00000589616 LPHN1-004 14159175-14161536 protein_coding
  ENST00000590223 LPHN1-003 14170488-14177650 retained_intron
  ENST00000591528 LPHN1-007 14162948-14170734 processed_transcript
  ENST00000592164 LPHN1-005 14151208-14152850 protein_coding
  ENST00000593005 LPHN1-006 14151169-14152839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000340736ENST00000361434ENST00000589616
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000340736 1.246±0.00 N/A N/A 10.040±0.00 N/A 1.265±0.00 N/A N/A N/A N/A 3.064±0.48 N/A 5.294±0.78
ENST00000361434 3.443±0.00 3.369±0.00 0.441±0.00 N/A 6.607±5.66 N/A 2.615±0.00 0.397±0.00 1.929±0.00 0.094±0.00 2.242±0.90 1.453±0.63 3.526±0.54
ENST00000589616 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.240±0.00 63.321±0.00 10.858±0.00 27.071±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 IEA transmembrane signaling receptor activity
GO:0004930 IEA G-protein coupled receptor activity
GO:0005515 IPI:IEA protein binding
GO:0005886 ISS plasma membrane
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007166 IEA cell surface receptor signaling pathway
GO:0007186 TAS:IEA G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016524 ISS latrotoxin receptor activity
GO:0030054 IEA cell junction
GO:0030246 IEA carbohydrate binding
GO:0030424 ISS axon
GO:0030426 ISS growth cone
GO:0035584 ISS calcium-mediated signaling using intracellular calcium source
GO:0042734 ISS presynaptic membrane
GO:0043005 ISS neuron projection
GO:0045202 ISS synapse
GO:0050839 ISS cell adhesion molecule binding
GO:0090129 ISS positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089292 LPHN1 (2 of 2) latrophilin 1 protein_coding Danio_rerio
ENSMUSG00000013033 Lphn1 latrophilin 1 protein_coding Mus_musculus

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