C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: latrophilin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000013033 Lphn1 10090 + 8:83900105-83941954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045393 Lphn1-003 83900715-83940011 protein_coding
  ENSMUST00000124355 Lphn1-002 83900573-83940011 nonsense_mediated_decay
  ENSMUST00000131018 Lphn1-010 83937655-83938865 protein_coding
  ENSMUST00000131717 Lphn1-006 83924151-83940011 protein_coding
  ENSMUST00000132500 Lphn1-004 83900735-83939987 protein_coding
  ENSMUST00000139575 Lphn1-007 83923092-83930052 processed_transcript
  ENSMUST00000141158 Lphn1-001 83900105-83941954 protein_coding
  ENSMUST00000141661 Lphn1-009 83936155-83937828 retained_intron
  ENSMUST00000150674 Lphn1-008 83934577-83937496 retained_intron
  ENSMUST00000152978 Lphn1-005 83900735-83939987 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045393ENSMUST00000131717ENSMUST00000132500ENSMUST00000141158
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045393 N/A 8.929±2.10 N/A N/A 3.406±0.74 N/A N/A N/A 0.435±0.00 N/A N/A 13.654±0.32 N/A N/A
ENSMUST00000131717 N/A 9.095±0.00 N/A N/A N/A 3.039±0.58 N/A N/A N/A 6.723±0.24 N/A N/A N/A N/A
ENSMUST00000132500 N/A 11.150±3.45 N/A N/A N/A 2.633±0.64 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141158 15.092±9.91 20.713±2.65 17.779±0.06 32.927±13.78 5.347±1.95 6.037±1.68 4.687±1.42 5.172±1.47 1.784±1.06 12.386±0.12 2.916±1.23 26.303±9.43 2.119±1.15 8.369±1.37

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004930 IEA G-protein coupled receptor activity
GO:0005886 IEA plasma membrane
GO:0007157 ISS heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
GO:0007218 IEA neuropeptide signaling pathway
GO:0016021 IEA integral component of membrane
GO:0016524 ISS latrotoxin receptor activity
GO:0030054 IEA cell junction
GO:0030246 IEA carbohydrate binding
GO:0030424 ISS axon
GO:0030426 ISS growth cone
GO:0035584 ISS calcium-mediated signaling using intracellular calcium source
GO:0042734 ISS presynaptic membrane
GO:0043005 ISS neuron projection
GO:0045202 ISS synapse
GO:0050839 ISS cell adhesion molecule binding
GO:0090129 ISS positive regulation of synapse maturation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000089292 LPHN1 (2 of 2) latrophilin 1 protein_coding Danio_rerio
ENSG00000072071 LPHN1 latrophilin 1 protein_coding Homo_sapiens

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