C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transmembrane protein 38A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000072954 TMEM38A 9606 + 19:16661127-16690029 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000187762 TMEM38A-001 16661127-16690029 protein_coding
  ENST00000595452 TMEM38A-002 16661242-16680937 retained_intron
  ENST00000599479 TMEM38A-003 16661261-16689006 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000187762ENST00000595452ENST00000599479
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000187762 0.676±0.00 1.460±0.00 0.447±0.00 7.135±0.65 2.895±2.61 0.933±0.89 5.355±3.27 3.348±2.14 1.255±1.02 1.611±0.00 92.859±43.33 1.468±1.17 0.614±0.35 3.139±2.31
ENST00000595452 N/A N/A 0.744±0.00 N/A N/A N/A N/A N/A 0.553±0.00 1.064±0.00 N/A 1.206±0.92 0.376±0.00 0.507±0.00
ENST00000599479 0.830±0.00 N/A N/A N/A N/A N/A N/A N/A 2.621±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006G1 CIL_0006G1_0001 CGP 19:16661127-16817963

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005261 IEA cation channel activity
GO:0005267 TAS potassium channel activity
GO:0015672 IEA monovalent inorganic cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0031965 NAS nuclear membrane
GO:0033017 NAS sarcoplasmic reticulum membrane
GO:0070062 IDA extracellular vesicular exosome
GO:0071805 IEA potassium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024047 tmem38a transmembrane protein 38A protein_coding Danio_rerio
ENSMUSG00000031791 Tmem38a transmembrane protein 38A protein_coding Mus_musculus

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