C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000073578 SDHA 9606 + 5:218241-256700 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264932 SDHA-001 218241-256700 protein_coding
  ENST00000502379 SDHA-011 218311-224843 retained_intron
  ENST00000503674 SDHA-005 249054-256679 retained_intron
  ENST00000504309 SDHA-002 218303-256682 protein_coding
  ENST00000504824 SDHA-009 218371-235524 retained_intron
  ENST00000505555 SDHA-003 218316-251864 retained_intron
  ENST00000507266 SDHA-021 250694-251359 retained_intron
  ENST00000507522 SDHA-019 251341-256679 processed_transcript
  ENST00000509082 SDHA-020 240444-256682 processed_transcript
  ENST00000509420 SDHA-015 225633-230891 retained_intron
  ENST00000509564 SDHA-018 251337-256682 protein_coding
  ENST00000509632 SDHA-010 218327-225562 nonsense_mediated_decay
  ENST00000510361 SDHA-004 218318-256679 protein_coding
  ENST00000511810 SDHA-006 234421-256679 retained_intron
  ENST00000512962 SDHA-014 230943-236516 retained_intron
  ENST00000514027 SDHA-008 227609-256679 retained_intron
  ENST00000514233 SDHA-013 227626-233629 processed_transcript
  ENST00000515752 SDHA-007 230943-256648 retained_intron
  ENST00000515815 SDHA-017 236513-256682 protein_coding
  ENST00000617470 SDHA-201 218241-256697 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264932ENST00000504309ENST00000504824ENST00000505555ENST00000509082
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264932 23.052±0.00 26.225±0.00 17.751±0.00 41.590±10.54 25.483±15.13 18.752±0.69 101.883±48.04 52.301±0.50 26.684±11.10 18.292±8.00 68.611±16.85 22.337±14.17 40.134±5.69 42.100±8.93
ENST00000504309 N/A N/A 7.943±0.00 N/A N/A 6.732±0.54 N/A N/A N/A N/A 11.337±0.00 N/A N/A N/A
ENST00000504824 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.793±0.00 N/A N/A
ENST00000505555 N/A N/A N/A N/A N/A 5.744±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509082 N/A N/A N/A N/A N/A N/A N/A 58.137±0.00 46.432±0.00 38.313±0.00 N/A 34.380±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000104 IMP succinate dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0006105 IDA succinate metabolic process
GO:0007399 IMP nervous system development
GO:0008177 IEA succinate dehydrogenase (ubiquinone) activity
GO:0016491 IEA oxidoreductase activity
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0022900 IEA electron transport chain
GO:0022904 IDA respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IDA:IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016721 sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein_coding Danio_rerio
ENSMUSG00000021577 Sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein_coding Mus_musculus

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