C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264932 SDHA-001 ENSG00000073578 9606 + 5:218241-256700 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264932
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264932 23.052±0.00 26.225±0.00 17.751±0.00 41.590±10.54 25.483±15.13 18.752±0.69 101.883±48.04 52.301±0.50 26.684±11.10 18.292±8.00 68.611±16.85 22.337±14.17 40.134±5.69 42.100±8.93

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000104 IMP succinate dehydrogenase activity
GO:0005515 IPI protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0006105 IDA succinate metabolic process
GO:0007399 IMP nervous system development
GO:0008177 IEA succinate dehydrogenase (ubiquinone) activity
GO:0016491 IEA oxidoreductase activity
GO:0016627 IEA oxidoreductase activity, acting on the CH-CH group of donors
GO:0022900 IEA electron transport chain
GO:0022904 IDA respiratory electron transport chain
GO:0044237 TAS cellular metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0050660 IEA flavin adenine dinucleotide binding
GO:0055114 IDA:IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000022062 Sdha-001 protein_coding Mus_musculus 0 2241
ENSMUST00000160667 Sdha-006 processed_transcript Mus_musculus 0 492
ENSMUST00000161086 Sdha-003 retained_intron Mus_musculus 0 425
ENSMUST00000160400 Sdha-002 retained_intron Mus_musculus 0 287

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