C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021577 Sdha 10090 - 13:74322254-74350280 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000022062 Sdha-001 74322254-74350280 protein_coding
  ENSMUST00000160400 Sdha-002 74343242-74350239 retained_intron
  ENSMUST00000160667 Sdha-006 74337482-74350202 processed_transcript
  ENSMUST00000160900 Sdha-007 74327295-74328471 retained_intron
  ENSMUST00000161086 Sdha-003 74338993-74339756 retained_intron
  ENSMUST00000161434 Sdha-008 74322732-74324256 retained_intron
  ENSMUST00000161456 Sdha-004 74344917-74350235 processed_transcript
  ENSMUST00000162137 Sdha-005 74344878-74350157 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000022062ENSMUST00000160667ENSMUST00000160900ENSMUST00000161086
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000022062 142.947±20.21 116.620±27.16 68.496±1.30 56.895±15.37 157.396±36.12 73.951±23.92 389.847±8.40 265.442±36.64 109.951±38.38 58.208±5.89 239.596±12.15 89.917±9.22 56.381±19.40 32.186±10.86
ENSMUST00000160667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 55.071±0.00
ENSMUST00000160900 N/A N/A N/A 1786.480±0.00 N/A N/A N/A N/A N/A N/A N/A 1597.290±0.00 1105.969±264.55 290.949±0.00
ENSMUST00000161086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 63.804±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000JD CIL_0000JD_0002 CGP 13:74322254-74365783

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000104 ISS succinate dehydrogenase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005743 ISS mitochondrial inner membrane
GO:0005749 ISS mitochondrial respiratory chain complex II
GO:0006099 IEA tricarboxylic acid cycle
GO:0006105 ISS succinate metabolic process
GO:0007399 IEA nervous system development
GO:0008177 IEA succinate dehydrogenase (ubiquinone) activity
GO:0022904 ISS respiratory electron transport chain
GO:0050660 IEA flavin adenine dinucleotide binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016721 sdha succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein_coding Danio_rerio
ENSG00000073578 SDHA succinate dehydrogenase complex, subunit A, flavoprotein (Fp) protein_coding Homo_sapiens

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