C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WSC domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000075035 WSCD2 9606 + 12:108129471-108250537 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000332082 WSCD2-002 108131751-108250537 protein_coding
  ENST00000546401 WSCD2-009 108131731-108195686 processed_transcript
  ENST00000546629 WSCD2-012 108226990-108233129 retained_intron
  ENST00000546811 WSCD2-011 108189346-108195313 processed_transcript
  ENST00000547185 WSCD2-013 108196195-108197184 processed_transcript
  ENST00000547525 WSCD2-001 108129471-108250119 protein_coding
  ENST00000549903 WSCD2-003 108195833-108250119 protein_coding
  ENST00000550529 WSCD2-005 108129603-108195566 processed_transcript
  ENST00000551057 WSCD2-007 108131780-108195447 processed_transcript
  ENST00000551106 WSCD2-006 108129669-108195494 processed_transcript
  ENST00000551638 WSCD2-008 108129806-108227015 protein_coding
  ENST00000551734 WSCD2-010 108131781-108195583 processed_transcript
  ENST00000552195 WSCD2-004 108129590-108195337 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000332082ENST00000546401ENST00000546629ENST00000546811ENST00000547525ENST00000549903ENST00000550529ENST00000551638ENST00000551734ENST00000552195
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000332082 0.034±0.00 N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000546401 N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A N/A 0.135±0.00
ENST00000546629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 0.319±0.00 N/A
ENST00000546811 N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547525 N/A 1.657±0.00 N/A 2.523±0.51 0.655±0.01 0.807±0.00 0.179±0.00 0.128±0.00 N/A 0.196±0.00 0.290±0.00 0.413±0.11 0.186±0.04 0.319±0.00
ENST00000549903 N/A 0.809±0.00 0.036±0.00 2.453±1.56 N/A 0.345±0.00 0.050±0.00 0.524±0.00 0.064±0.05 0.126±0.09 0.087±0.00 0.184±0.16 0.124±0.05 0.242±0.09
ENST00000550529 N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A N/A
ENST00000551638 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 0.683±0.00 N/A
ENST00000551734 N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552195 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M9 CIL_0001M9_0001 CGP 12:108129471-108339341

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061819 wscd2 WSC domain containing 2 protein_coding Danio_rerio
ENSMUSG00000063430 Wscd2 WSC domain containing 2 protein_coding Mus_musculus

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