C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001M9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000075035-ENSG00000174600 CGP 9606 12:108129471-108339341
GeneTranscriptPositionBiotype
ENSG00000075035 (WSCD2)
WSC domain containing 2 		ENST00000332082 (WSCD2-002) 108131751-108250537 protein_coding
ENST00000546401 (WSCD2-009) 108131731-108195686 processed_transcript
ENST00000546629 (WSCD2-012) 108226990-108233129 retained_intron
ENST00000546811 (WSCD2-011) 108189346-108195313 processed_transcript
ENST00000547185 (WSCD2-013) 108196195-108197184 processed_transcript
ENST00000547525 (WSCD2-001) 108129471-108250119 protein_coding
ENST00000549903 (WSCD2-003) 108195833-108250119 protein_coding
ENST00000550529 (WSCD2-005) 108129603-108195566 processed_transcript
ENST00000551057 (WSCD2-007) 108131780-108195447 processed_transcript
ENST00000551106 (WSCD2-006) 108129669-108195494 processed_transcript
ENST00000551638 (WSCD2-008) 108129806-108227015 protein_coding
ENST00000551734 (WSCD2-010) 108131781-108195583 processed_transcript
ENST00000552195 (WSCD2-004) 108129590-108195337 processed_transcript
ENSG00000174600 (CMKLR1)
chemokine-like receptor 1 		ENST00000312143 (CMKLR1-001) 108288044-108339317 protein_coding
ENST00000412676 (CMKLR1-201) 108288044-108320662 protein_coding
ENST00000549466 (CMKLR1-004) 108292533-108317917 protein_coding
ENST00000550402 (CMKLR1-002) 108291671-108339341 protein_coding
ENST00000550573 (CMKLR1-003) 108292522-108320662 protein_coding
ENST00000552995 (CMKLR1-005) 108291570-108339313 protein_coding
ENSG00000257281 (RP11-1K3.1)
 ENST00000548873 (RP11-1K3.1-001) 108281103-108282235 processed_pseudogene
CIL_0001M9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063430-ENSMUSG00000042190 CGP 10090 5:113490333-113650426
GeneTranscriptPositionBiotype
ENSMUSG00000042190 (Cmklr1)
chemokine-like receptor 1 		ENSMUST00000047936 (Cmklr1-001) 113612354-113650426 protein_coding
ENSMUST00000132065 (Cmklr1-002) 113614036-113627615 protein_coding
ENSMUST00000142854 (Cmklr1-004) 113614927-113643603 protein_coding
ENSMUST00000151460 (Cmklr1-003) 113631306-113650396 processed_transcript
ENSMUSG00000063430 (Wscd2)
WSC domain containing 2 		ENSMUST00000094452 (Wscd2-001) 113490447-113589725 protein_coding
ENSMUST00000138757 (Wscd2-003) 113490333-113493141 retained_intron
ENSMUST00000180565 (Wscd2-004) 113549985-113556509 retained_intron
ENSMUST00000181294 (Wscd2-005) 113570919-113589718 processed_transcript
ENSMUST00000181650 (Wscd2-002) 113490752-113554584 retained_intron
ENSMUSG00000085713 (Gm15736)
predicted gene 15736 		ENSMUST00000141710 (Gm15736-001) 113644963-113645682 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M9_0001ENSG00000075035ENST00000332082ENST00000546401ENST00000546629ENST00000546811ENST00000547185ENST00000547525ENST00000549903ENST00000550529ENST00000551057ENST00000551106ENST00000551638ENST00000551734ENST00000552195ENSG00000174600ENST00000312143ENST00000412676ENST00000549466ENST00000550402ENST00000550573ENST00000552995ENSG00000257281ENST00000548873CIL_0001M9_0002ENSMUSG00000042190ENSMUST00000047936ENSMUST00000132065ENSMUST00000142854ENSMUST00000151460ENSMUSG00000063430ENSMUST00000094452ENSMUST00000138757ENSMUST00000180565ENSMUST00000181294ENSMUST00000181650ENSMUSG00000085713ENSMUST00000141710
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001M9_0001ENSG00000075035ENST00000332082ENST00000546401ENST00000546629ENST00000546811ENST00000547525ENST00000549903ENST00000550529ENST00000551638ENST00000551734ENST00000552195ENSG00000174600ENST00000312143ENST00000412676ENST00000550402ENST00000552995ENSG00000257281ENST00000548873CIL_0001M9_0002ENSMUSG00000042190ENSMUST00000047936ENSMUST00000132065ENSMUSG00000063430ENSMUST00000094452ENSMUST00000138757ENSMUST00000181294ENSMUSG00000085713ENSMUST00000141710
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075035 ENST00000332082 0.034±0.00 N/A N/A N/A N/A N/A 0.044±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000546401 N/A N/A N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A N/A 0.135±0.00
ENST00000546629 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.091±0.00 0.319±0.00 N/A
ENST00000546811 N/A N/A N/A N/A N/A 0.846±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000547525 N/A 1.657±0.00 N/A 2.523±0.51 0.655±0.01 0.807±0.00 0.179±0.00 0.128±0.00 N/A 0.196±0.00 0.290±0.00 0.413±0.11 0.186±0.04 0.319±0.00
ENST00000549903 N/A 0.809±0.00 0.036±0.00 2.453±1.56 N/A 0.345±0.00 0.050±0.00 0.524±0.00 0.064±0.05 0.126±0.09 0.087±0.00 0.184±0.16 0.124±0.05 0.242±0.09
ENST00000550529 N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 N/A N/A N/A N/A N/A N/A
ENST00000551057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551638 0.088±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 0.683±0.00 N/A
ENST00000551734 N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552195 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A
ENSG00000174600 ENST00000312143 N/A 1.718±0.00 0.433±0.00 0.494±0.00 1.237±0.00 0.936±0.27 N/A 0.701±0.11 1.565±0.00 3.538±0.66 N/A 0.471±0.30 4.919±1.57 2.179±1.83
ENST00000412676 N/A N/A N/A 0.240±0.00 N/A N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A
ENST00000549466 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000550402 N/A N/A 1.264±0.00 0.102±0.00 N/A 1.610±0.00 0.413±0.00 N/A 3.387±0.00 4.042±0.00 N/A N/A N/A N/A
ENST00000550573 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000552995 N/A N/A N/A 0.082±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257281 ENST00000548873 N/A N/A N/A 0.029±0.00 N/A N/A 0.018±0.01 0.027±0.00 N/A N/A N/A N/A N/A 0.034±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000042190 ENSMUST00000047936 24.907±15.87 3.878±2.09 2.743±0.27 0.466±0.07 13.362±6.42 1.593±0.61 1.781±0.57 1.278±0.08 0.574±0.12 27.587±12.45 0.999±0.33 4.623±1.36 4.732±3.79 9.602±2.39
ENSMUST00000132065 48.480±24.04 17.616±2.37 1.508±0.00 0.389±0.05 53.415±19.82 4.508±1.88 8.674±1.39 4.017±0.91 0.917±0.39 77.419±31.51 N/A 16.833±6.14 6.415±4.86 11.661±0.00
ENSMUST00000142854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151460 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000063430 ENSMUST00000094452 4.481±0.91 2.619±0.27 8.810±0.36 4.597±2.56 2.763±0.99 4.968±2.40 0.322±0.05 2.243±0.24 0.019±0.01 1.594±0.16 0.081±0.04 2.608±1.09 2.759±3.08 0.132±0.00
ENSMUST00000138757 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A
ENSMUST00000180565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000181294 N/A N/A 2.845±0.14 1.382±0.42 1.039±0.00 N/A 0.175±0.00 1.296±0.15 0.018±0.01 N/A 0.038±0.02 0.974±0.57 2.599±2.53 4.442±1.96
ENSMUST00000181650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085713 ENSMUST00000141710 0.292±0.19 N/A 0.033±0.00 N/A 0.179±0.00 N/A 0.127±0.00 N/A 0.350±0.00 0.453±0.12 N/A N/A N/A 0.448±0.23

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