C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: WSC domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063430 Wscd2 10090 + 5:113490333-113589725 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000094452 Wscd2-001 113490447-113589725 protein_coding
  ENSMUST00000138757 Wscd2-003 113490333-113493141 retained_intron
  ENSMUST00000180565 Wscd2-004 113549985-113556509 retained_intron
  ENSMUST00000181294 Wscd2-005 113570919-113589718 processed_transcript
  ENSMUST00000181650 Wscd2-002 113490752-113554584 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000094452ENSMUST00000138757ENSMUST00000181294
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000094452 4.481±0.91 2.619±0.27 8.810±0.36 4.597±2.56 2.763±0.99 4.968±2.40 0.322±0.05 2.243±0.24 0.019±0.01 1.594±0.16 0.081±0.04 2.608±1.09 2.759±3.08 0.132±0.00
ENSMUST00000138757 N/A N/A N/A N/A N/A N/A N/A N/A 0.002±0.00 N/A N/A N/A N/A N/A
ENSMUST00000181294 N/A N/A 2.845±0.14 1.382±0.42 1.039±0.00 N/A 0.175±0.00 1.296±0.15 0.018±0.01 N/A 0.038±0.02 0.974±0.57 2.599±2.53 4.442±1.96

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001M9 CIL_0001M9_0002 CGP 5:113490333-113650426

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061819 wscd2 WSC domain containing 2 protein_coding Danio_rerio
ENSG00000075035 WSCD2 WSC domain containing 2 protein_coding Homo_sapiens

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