C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin-like 6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000077080 ACTL6B 9606 - 7:100643097-100656461 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000160382 ACTL6B-001 100643097-100656461 protein_coding
  ENST00000461605 ACTL6B-002 100650063-100656433 protein_coding
  ENST00000485601 ACTL6B-004 100648228-100656435 retained_intron
  ENST00000487125 ACTL6B-006 100643142-100647738 retained_intron
  ENST00000487225 ACTL6B-003 100648729-100656366 retained_intron
  ENST00000489904 ACTL6B-005 100649961-100655453 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLiverLungOvaryPlacentaTestisENST00000160382ENST00000485601ENST00000487125ENST00000487225ENST00000489904
Transcript ID Adipose Adrenal Brain Colon Liver Lung Ovary Placenta Testis
ENST00000160382 N/A N/A 18.250±8.85 0.173±0.00 N/A N/A 0.054±0.00 N/A 0.097±0.00
ENST00000485601 0.067±0.00 0.073±0.00 N/A N/A N/A N/A 0.052±0.00 N/A 0.056±0.00
ENST00000487125 N/A N/A N/A 0.255±0.00 N/A 0.131±0.00 0.096±0.00 N/A N/A
ENST00000487225 N/A N/A N/A 0.594±0.00 N/A N/A N/A 0.142±0.00 N/A
ENST00000489904 N/A N/A N/A N/A 0.153±0.00 N/A N/A 0.078±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003713 NAS transcription coactivator activity
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006325 NAS chromatin organization
GO:0006338 IDA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006357 NAS regulation of transcription from RNA polymerase II promoter
GO:0007399 IEA nervous system development
GO:0016514 ISS SWI/SNF complex
GO:0071565 ISS nBAF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034107 actl6b actin-like 6B protein_coding Danio_rerio
ENSMUSG00000029712 Actl6b actin-like 6B protein_coding Mus_musculus

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