C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: actin-like 6B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029712 Actl6b 10090 + 5:137553517-137569582 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031725 Actl6b-007 137553557-137569557 nonsense_mediated_decay
  ENSMUST00000125489 Actl6b-006 137553555-137555032 protein_coding
  ENSMUST00000136088 Actl6b-002 137553517-137563204 protein_coding
  ENSMUST00000136565 Actl6b-004 137553539-137565778 protein_coding
  ENSMUST00000139395 Actl6b-001 137553520-137569582 protein_coding
  ENSMUST00000145500 Actl6b-003 137553538-137554346 retained_intron
  ENSMUST00000149292 Actl6b-005 137553555-137554677 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000031725ENSMUST00000125489ENSMUST00000136565ENSMUST00000139395ENSMUST00000145500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000031725 0.023±0.00 N/A N/A N/A 0.026±0.00 0.199±0.00 N/A 0.036±0.01 N/A 0.023±0.00 0.041±0.02 0.029±0.00 N/A
ENSMUST00000125489 N/A N/A N/A N/A N/A 0.662±0.09 N/A N/A N/A N/A N/A 0.036±0.00 N/A
ENSMUST00000136565 N/A 1.083±0.50 N/A N/A 0.128±0.04 0.366±0.10 0.068±0.00 0.021±0.00 N/A N/A N/A N/A 0.058±0.00
ENSMUST00000139395 0.028±0.01 0.616±0.21 0.036±0.00 69.831±37.78 0.059±0.00 0.293±0.11 0.075±0.00 0.075±0.04 0.083±0.09 0.021±0.00 0.061±0.04 0.027±0.02 0.118±0.06
ENSMUST00000145500 N/A N/A N/A N/A N/A 0.405±0.00 N/A N/A N/A N/A N/A N/A 0.202±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0006333 IC chromatin assembly or disassembly
GO:0006338 IEA chromatin remodeling
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007399 IMP nervous system development
GO:0016514 IDA SWI/SNF complex
GO:0071565 IDA nBAF complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034107 actl6b actin-like 6B protein_coding Danio_rerio
ENSG00000077080 ACTL6B actin-like 6B protein_coding Homo_sapiens

Loading