C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dual specificity phosphatase 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000079393 DUSP13 9606 - 10:75094432-75109221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000308475 DUSP13-001 75094436-75109185 nonsense_mediated_decay
  ENST00000372700 DUSP13-011 75094676-75109191 protein_coding
  ENST00000372702 DUSP13-012 75094434-75109221 protein_coding
  ENST00000394707 DUSP13-006 75094626-75109190 nonsense_mediated_decay
  ENST00000464872 DUSP13-007 75094436-75097884 protein_coding
  ENST00000472493 DUSP13-004 75094432-75099506 protein_coding
  ENST00000473072 DUSP13-008 75101944-75109206 protein_coding
  ENST00000478873 DUSP13-009 75094436-75099527 protein_coding
  ENST00000479884 DUSP13-010 75094439-75109212 nonsense_mediated_decay
  ENST00000491677 DUSP13-201 75094433-75109212 protein_coding
  ENST00000494588 DUSP13-005 75094664-75109218 nonsense_mediated_decay
  ENST00000605915 DUSP13-002 75094436-75099515 protein_coding
  ENST00000607009 DUSP13-003 75097743-75109191 processed_transcript
  ENST00000607131 DUSP13-202 75094441-75109099 protein_coding
  ENST00000607487 DUSP13-013 75095723-75109133 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartLungMuscleOvaryPlacentaTestisENST00000372700ENST00000394707ENST00000464872ENST00000472493ENST00000473072ENST00000478873ENST00000479884ENST00000491677ENST00000494588ENST00000605915ENST00000607009ENST00000607131ENST00000607487
Transcript ID Adipose Brain Breast Colon Heart Lung Muscle Ovary Placenta Testis
ENST00000372700 0.040±0.00 N/A N/A 0.034±0.00 N/A N/A 13.988±0.00 N/A 0.087±0.00 2.691±0.00
ENST00000394707 N/A N/A 1.525±0.00 N/A N/A N/A 17.039±0.00 N/A N/A N/A
ENST00000464872 N/A 0.048±0.00 2.038±0.00 N/A N/A N/A 22.318±0.00 0.113±0.00 N/A 4.659±1.72
ENST00000472493 N/A N/A N/A N/A 8.300±0.00 N/A N/A N/A N/A 2.531±0.00
ENST00000473072 N/A N/A N/A N/A N/A 0.269±0.00 N/A N/A N/A N/A
ENST00000478873 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.098±0.21
ENST00000479884 N/A N/A N/A N/A N/A N/A 13.457±0.00 N/A N/A N/A
ENST00000491677 N/A N/A N/A N/A N/A N/A 10.589±7.02 N/A N/A N/A
ENST00000494588 N/A N/A 0.795±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000605915 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.022±0.97
ENST00000607009 0.037±0.00 N/A N/A N/A N/A N/A N/A 0.066±0.01 0.138±0.00 N/A
ENST00000607131 N/A N/A N/A N/A 5.962±0.00 0.309±0.00 14.936±0.00 N/A N/A N/A
ENST00000607487 N/A N/A N/A N/A N/A N/A N/A 0.126±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_0006DL CIL_0006DL_0002 CGP 10:75037836-75109221
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0007IJ CIL_0007IJ_0001 CGP 10:75094432-75182123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0006470 IBA:IEA protein dephosphorylation
GO:0007126 TAS meiotic nuclear division
GO:0007283 TAS spermatogenesis
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0016311 IEA dephosphorylation
GO:0016791 IEA phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061498 DUSP13 (1 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSDARG00000091224 DUSP13 (2 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSDARG00000094665 DUSP13 (3 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSMUSG00000021768 Dusp13 dual specificity phosphatase 13 protein_coding Mus_musculus

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