C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: dual specificity phosphatase 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394707 DUSP13-006 ENSG00000079393 9606 - 10:75094626-75109190 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastMuscleENST00000394707
Transcript ID Breast Muscle
ENST00000394707 1.525±0.00 17.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JX CIL_0007JX_0001 UCNEbase 10:74418410-76978156
CIL_0008UO CIL_0008UO_0001 VISTA 10:74941035-75542526
CIL_000925 CIL_000925_0001 VISTA 10:74961440-75563087
CIL_0006DL CIL_0006DL_0002 CGP 10:75037836-75109221
CIL_00084B CIL_00084B_0001 VISTA 10:75078488-75679926
CIL_0007IJ CIL_0007IJ_0001 CGP 10:75094432-75182123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IDA cytoplasm
GO:0008138 IEA protein tyrosine/serine/threonine phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000183893 Dusp13-010 nonsense_mediated_decay Mus_musculus 0 900
ENSMUST00000127851 Dusp13-005 nonsense_mediated_decay Mus_musculus 0 760
ENSMUST00000075040 Dusp13-002 protein_coding Mus_musculus 0 760
ENSMUST00000184571 Dusp13-009 nonsense_mediated_decay Mus_musculus 0 708
ENSMUST00000119866 Dusp13-004 protein_coding Mus_musculus 0 656
ENSMUST00000183698 Dusp13-011 protein_coding Mus_musculus 0 656
ENSMUST00000120984 Dusp13-003 protein_coding Mus_musculus 0 654
ENSMUST00000183943 Dusp13-012 protein_coding Mus_musculus 0 652
ENSMUST00000120956 Dusp13-001 protein_coding Mus_musculus 0 652
ENSMUST00000184703 Dusp13-008 protein_coding Mus_musculus 0 652

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