C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dual specificity phosphatase 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000021768 Dusp13 10090 - 14:21733394-21751181 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000075040 Dusp13-002 21733395-21748622 protein_coding
  ENSMUST00000119866 Dusp13-004 21733395-21741519 protein_coding
  ENSMUST00000120956 Dusp13-001 21733395-21742879 protein_coding
  ENSMUST00000120984 Dusp13-003 21733395-21740401 protein_coding
  ENSMUST00000127051 Dusp13-006 21744874-21751181 processed_transcript
  ENSMUST00000127851 Dusp13-005 21733398-21748642 nonsense_mediated_decay
  ENSMUST00000153071 Dusp13-007 21740144-21746485 protein_coding
  ENSMUST00000183698 Dusp13-011 21733395-21741505 protein_coding
  ENSMUST00000183824 Dusp13-013 21740135-21748626 processed_transcript
  ENSMUST00000183893 Dusp13-010 21733589-21748620 nonsense_mediated_decay
  ENSMUST00000183943 Dusp13-012 21733649-21748626 protein_coding
  ENSMUST00000184571 Dusp13-009 21733395-21748620 nonsense_mediated_decay
  ENSMUST00000184703 Dusp13-008 21733394-21741476 protein_coding
  ENSMUST00000185042 Dusp13-014 21743512-21748638 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000075040ENSMUST00000119866ENSMUST00000120956ENSMUST00000120984ENSMUST00000127051ENSMUST00000153071ENSMUST00000183698ENSMUST00000183824ENSMUST00000183893ENSMUST00000183943ENSMUST00000184571ENSMUST00000184703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000075040 N/A N/A N/A N/A 8.460±0.50 N/A N/A 0.191±0.00 N/A 0.500±0.10 40.466±5.77 N/A 0.097±0.01 N/A
ENSMUST00000119866 0.048±0.00 0.061±0.00 N/A N/A N/A 0.280±0.00 0.045±0.00 0.120±0.00 0.019±0.00 N/A N/A N/A N/A 43.232±1.62
ENSMUST00000120956 0.098±0.00 N/A N/A 0.168±0.00 N/A N/A 0.140±0.00 N/A N/A 0.647±0.00 N/A 0.292±0.08 0.413±0.13 92.823±23.15
ENSMUST00000120984 N/A N/A 0.074±0.00 N/A 7.785±5.45 0.482±0.16 N/A 0.242±0.04 0.032±0.00 0.189±0.09 N/A 0.760±0.00 0.159±0.00 181.675±4.34
ENSMUST00000127051 N/A 0.194±0.11 0.033±0.00 N/A 0.117±0.06 0.195±0.06 N/A 0.186±0.15 0.047±0.03 N/A N/A 0.303±0.13 0.608±0.39 N/A
ENSMUST00000153071 0.130±0.00 N/A N/A N/A 0.087±0.00 0.094±0.00 N/A N/A 0.081±0.06 N/A N/A 0.235±0.00 N/A N/A
ENSMUST00000183698 N/A 0.291±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000183824 N/A N/A N/A N/A N/A 0.122±0.00 0.081±0.00 N/A 0.072±0.00 N/A N/A N/A N/A N/A
ENSMUST00000183893 0.076±0.03 0.177±0.00 N/A 0.012±0.00 N/A 0.074±0.00 0.109±0.02 0.150±0.05 N/A 0.073±0.00 N/A 0.336±0.00 0.559±0.00 N/A
ENSMUST00000183943 0.103±0.00 0.387±0.10 0.048±0.00 0.275±0.00 11.645±8.26 0.310±0.24 0.161±0.09 0.252±0.00 0.026±0.00 0.751±0.43 N/A 0.481±0.33 N/A N/A
ENSMUST00000184571 0.060±0.01 N/A N/A N/A N/A 0.203±0.00 N/A N/A 0.024±0.01 N/A N/A N/A N/A N/A
ENSMUST00000184703 N/A 0.365±0.00 0.020±0.00 0.008±0.00 0.197±0.00 0.233±0.10 0.085±0.04 0.228±0.14 0.046±0.03 0.727±0.00 N/A 0.357±0.13 1.025±0.64 84.066±5.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00082Q CIL_00082Q_0002 VISTA 14:21162242-21763695
CIL_0007JX CIL_0007JX_0002 UCNEbase 14:21252402-23394598
CIL_0008UO CIL_0008UO_0002 VISTA 14:21553194-22153685
CIL_000925 CIL_000925_0002 VISTA 14:21565849-22167377
CIL_00084B CIL_00084B_0002 VISTA 14:21666827-22268239
CIL_0006DL CIL_0006DL_0003 CGP 14:21676582-21751181
CIL_0008K8 CIL_0008K8_0002 VISTA 14:21690858-22291990
CIL_0007IJ CIL_0007IJ_0002 CGP 14:21733394-21798725

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005737 IEA cytoplasm
GO:0006470 IBA protein dephosphorylation
GO:0008138 IDA protein tyrosine/serine/threonine phosphatase activity
GO:0035335 IEA peptidyl-tyrosine dephosphorylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061498 DUSP13 (1 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSDARG00000091224 DUSP13 (2 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSDARG00000094665 DUSP13 (3 of 3) dual specificity phosphatase 13 protein_coding Danio_rerio
ENSG00000079393 DUSP13 dual specificity phosphatase 13 protein_coding Homo_sapiens

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