C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EPH receptor A6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000080224 EPHA6 9606 + 3:96814581-97752460 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000389672 EPHA6-002 96814586-97749241 protein_coding
  ENST00000470610 EPHA6-001 96814581-97244696 protein_coding
  ENST00000477384 EPHA6-004 97439610-97747531 nonsense_mediated_decay
  ENST00000502694 EPHA6-006 97441416-97648577 protein_coding
  ENST00000503760 EPHA6-003 97439610-97610824 nonsense_mediated_decay
  ENST00000506349 EPHA6-009 97747520-97752460 nonsense_mediated_decay
  ENST00000506569 EPHA6-005 96814791-97010134 protein_coding
  ENST00000508345 EPHA6-008 97441416-97638063 nonsense_mediated_decay
  ENST00000514100 EPHA6-007 97439630-97648573 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000389672ENST00000470610ENST00000477384ENST00000502694ENST00000506349ENST00000506569ENST00000508345
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000389672 N/A N/A 1.060±0.13 N/A 0.163±0.00 0.038±0.00 N/A 0.395±0.00 N/A 0.152±0.06 N/A 1.577±0.03
ENST00000470610 N/A N/A N/A 0.088±0.03 0.556±0.05 0.047±0.00 N/A 0.325±0.00 0.044±0.00 0.426±0.12 N/A N/A
ENST00000477384 0.037±0.00 N/A N/A N/A N/A N/A N/A N/A 0.067±0.00 N/A N/A N/A
ENST00000502694 N/A N/A N/A N/A N/A 0.043±0.00 N/A N/A N/A N/A N/A 3.919±0.00
ENST00000506349 N/A N/A N/A N/A 0.681±0.00 N/A 0.048±0.00 0.041±0.00 N/A N/A N/A N/A
ENST00000506569 0.077±0.00 0.026±0.00 N/A 0.228±0.18 N/A 0.049±0.00 0.105±0.00 N/A N/A N/A 0.049±0.00 N/A
ENST00000508345 N/A 0.048±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022M CIL_00022M_0002 CGP 3:96814581-97801109

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005003 IEA ephrin receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005634 IDA nucleus
GO:0005887 IEA integral component of plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0048013 IEA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000022971 epha6 eph receptor A6 protein_coding Danio_rerio
ENSMUSG00000055540 Epha6 Eph receptor A6 protein_coding Mus_musculus

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