C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EPH receptor A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000470610 EPHA6-001 ENSG00000080224 9606 + 3:96814581-97244696 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLiverLungOvaryENST00000470610
Transcript ID Breast Colon Heart Liver Lung Ovary
ENST00000470610 0.088±0.03 0.556±0.05 0.047±0.00 0.325±0.00 0.044±0.00 0.426±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022M CIL_00022M_0002 CGP 3:96814581-97801109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005003 IEA ephrin receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0006468 IEA protein phosphorylation
GO:0016021 IEA integral component of membrane
GO:0048013 IEA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068860 Epha6-001 protein_coding Mus_musculus 0 2102
ENSMUST00000159383 Epha6-002 retained_intron Mus_musculus 0 1467
ENSMUST00000162129 Epha6-004 processed_transcript Mus_musculus 0 462

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