C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EPH receptor A6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000389672 EPHA6-002 ENSG00000080224 9606 + 3:96814586-97749241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverOvaryTestisENST00000389672
Transcript ID Brain Colon Heart Liver Ovary Testis
ENST00000389672 1.060±0.13 0.163±0.00 0.038±0.00 0.395±0.00 0.152±0.06 1.577±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00022M CIL_00022M_0002 CGP 3:96814581-97801109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004672 IEA protein kinase activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005003 IEA ephrin receptor activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005575 ND cellular_component
GO:0005634 IDA nucleus
GO:0005887 IEA integral component of plasma membrane
GO:0006468 IEA protein phosphorylation
GO:0008150 ND biological_process
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0018108 IEA peptidyl-tyrosine phosphorylation
GO:0048013 IEA ephrin receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068860 Epha6-001 protein_coding Mus_musculus 0 4643
ENSMUST00000159383 Epha6-002 retained_intron Mus_musculus 0 1458
ENSMUST00000161358 Epha6-003 protein_coding Mus_musculus 0 1312
ENSMUST00000162129 Epha6-004 processed_transcript Mus_musculus 0 462

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