C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: osteopetrosis associated transmembrane protein 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000081087 OSTM1 9606 - 6:108041409-108165854 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000193322 OSTM1-001 108041409-108074737 protein_coding
  ENST00000440575 OSTM1-006 108044831-108165840 protein_coding
  ENST00000467960 OSTM1-002 108064185-108074741 processed_transcript
  ENST00000472669 OSTM1-005 108044379-108051066 processed_transcript
  ENST00000477774 OSTM1-004 108044733-108049668 processed_transcript
  ENST00000492070 OSTM1-007 108122336-108165854 processed_transcript
  ENST00000492130 OSTM1-003 108041472-108044238 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000193322ENST00000440575ENST00000492130
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000193322 1.582±0.00 1.293±0.00 1.005±0.00 1.973±0.17 2.804±0.52 0.877±0.00 1.331±0.00 2.633±1.62 0.906±0.00 2.251±0.92 0.169±0.00 1.440±0.89 0.882±0.00 1.143±0.07
ENST00000440575 N/A N/A N/A N/A N/A N/A 0.921±0.00 1.495±0.00 4.170±0.00 N/A 1.954±0.00 2.620±0.30 4.890±0.00 5.450±0.00
ENST00000492130 N/A 3.074±0.00 N/A 1.155±0.00 4.478±0.00 2.446±0.00 N/A N/A N/A N/A N/A 1.257±0.27 2.602±0.00 1.836±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007KA CIL_0007KA_0001 UCNEbase 6:107632412-108443377
CIL_0008G4 CIL_0008G4_0001 VISTA 6:107814126-108415302
CIL_0009BP CIL_0009BP_0001 VISTA 6:107816039-108417248

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005765 TAS lysosomal membrane
GO:0005829 IEA cytosol
GO:0016021 IEA integral component of membrane
GO:0030316 IEA osteoclast differentiation
GO:0034220 TAS ion transmembrane transport
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069808 ostm1 osteopetrosis associated transmembrane protein 1 protein_coding Danio_rerio
ENSMUSG00000038280 Ostm1 osteopetrosis associated transmembrane protein 1 protein_coding Mus_musculus

Loading