C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transient receptor potential cation channel, subfamily M, member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000083067 TRPM3 9606 - 9:70529063-71446904 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000354500 TRPM3-001 70824436-71446904 retained_intron
  ENST00000357533 TRPM3-014 70535944-71446835 protein_coding
  ENST00000358082 TRPM3-015 70535953-70862910 protein_coding
  ENST00000360823 TRPM3-201 70535052-70869058 protein_coding
  ENST00000361823 TRPM3-005 70783860-70869029 protein_coding
  ENST00000377097 TRPM3-006 70842919-70863038 protein_coding
  ENST00000377101 TRPM3-010 70760688-70869052 protein_coding
  ENST00000377105 TRPM3-202 70535052-70869058 protein_coding
  ENST00000377110 TRPM3-008 70529063-71121598 protein_coding
  ENST00000377111 TRPM3-007 70535033-71121598 protein_coding
  ENST00000396280 TRPM3-012 70535953-70862910 protein_coding
  ENST00000396283 TRPM3-002 70774088-70869023 protein_coding
  ENST00000396285 TRPM3-009 70535953-70862910 protein_coding
  ENST00000396292 TRPM3-011 70535953-70862910 protein_coding
  ENST00000408909 TRPM3-016 70535953-70862910 protein_coding
  ENST00000437699 TRPM3-004 70862922-70865469 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000354500ENST00000357533ENST00000358082ENST00000360823ENST00000361823ENST00000377101ENST00000377110ENST00000377111ENST00000396280ENST00000396283ENST00000396285ENST00000396292ENST00000408909
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000354500 0.019±0.00 0.110±0.00 N/A N/A 0.031±0.01 N/A 0.067±0.00 0.014±0.00 0.033±0.00 0.005±0.00 0.092±0.00 0.007±0.00 N/A
ENST00000357533 N/A N/A N/A N/A N/A 0.049±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000358082 N/A N/A 1.614±0.00 N/A 0.022±0.00 N/A 0.096±0.00 N/A N/A N/A 0.006±0.00 0.044±0.00 N/A
ENST00000360823 N/A N/A N/A N/A N/A N/A 0.104±0.00 N/A N/A N/A N/A N/A N/A
ENST00000361823 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.440±0.00 0.053±0.02 1.293±0.00
ENST00000377101 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.602±0.05
ENST00000377110 N/A N/A 1.397±0.00 2.177±0.00 0.006±0.00 N/A N/A N/A 0.006±0.00 N/A N/A 0.007±0.00 0.103±0.00
ENST00000377111 N/A N/A N/A N/A N/A 0.024±0.00 N/A N/A N/A N/A N/A 0.010±0.00 N/A
ENST00000396280 0.034±0.00 N/A N/A N/A 0.034±0.00 N/A N/A N/A 0.067±0.00 N/A N/A 0.026±0.02 N/A
ENST00000396283 N/A N/A 2.888±0.00 N/A N/A N/A N/A 0.161±0.00 N/A N/A N/A N/A N/A
ENST00000396285 N/A N/A 2.696±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000396292 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00
ENST00000408909 N/A N/A N/A 1.828±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005227 IEA calcium activated cation channel activity
GO:0005261 IDA cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006812 IDA cation transport
GO:0007216 IEA G-protein coupled glutamate receptor signaling pathway
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016048 IEA detection of temperature stimulus
GO:0034220 TAS ion transmembrane transport
GO:0050951 IEA sensory perception of temperature stimulus
GO:0055085 IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport
GO:0071482 IEA cellular response to light stimulus
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039181 trpm3 transient receptor potential cation channel, subfamily M, member 3 protein_coding Danio_rerio
ENSMUSG00000052387 Trpm3 transient receptor potential cation channel, subfamily M, member 3 protein_coding Mus_musculus

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