C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily M, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000377110 TRPM3-008 ENSG00000083067 9606 - 9:70529063-71121598 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastLungPlacentaTestisENST00000377110
Transcript ID Bladder Brain Breast Lung Placenta Testis
ENST00000377110 1.397±0.00 2.177±0.00 0.006±0.00 0.006±0.00 0.007±0.00 0.103±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005227 IEA calcium activated cation channel activity
GO:0005261 IDA cation channel activity
GO:0005262 IEA calcium channel activity
GO:0005886 TAS plasma membrane
GO:0006811 IEA ion transport
GO:0006812 IDA cation transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0016048 IEA detection of temperature stimulus
GO:0034220 TAS ion transmembrane transport
GO:0050951 IEA sensory perception of temperature stimulus
GO:0055085 TAS:IEA transmembrane transport
GO:0070588 TAS calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087576 Trpm3-203 protein_coding Mus_musculus 0 5893
ENSMUST00000074770 Trpm3-202 protein_coding Mus_musculus 0 5624
ENSMUST00000099569 Trpm3-206 protein_coding Mus_musculus 0 4276
ENSMUST00000037901 Trpm3-201 protein_coding Mus_musculus 0 3155
ENSMUST00000099564 Trpm3-204 protein_coding Mus_musculus 0 1893
ENSMUST00000099566 Trpm3-205 protein_coding Mus_musculus 0 1387
ENSDART00000147919 trpm1a-003 protein_coding Danio_rerio 0 904
ENSDART00000052584 trpm1a-201 protein_coding Danio_rerio 0 438

Loading