C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SH3-domain binding protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000087266 SH3BP2 9606 + 4:2793023-2841098 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356331 SH3BP2-007 2818814-2841098 protein_coding
  ENST00000435136 SH3BP2-002 2812304-2834288 protein_coding
  ENST00000442312 SH3BP2-201 2812219-2841096 protein_coding
  ENST00000452765 SH3BP2-001 2793023-2834293 protein_coding
  ENST00000502260 SH3BP2-019 2812290-2825196 protein_coding
  ENST00000503219 SH3BP2-010 2793071-2825196 protein_coding
  ENST00000503393 SH3BP2-202 2818185-2841096 protein_coding
  ENST00000504294 SH3BP2-012 2798564-2827318 protein_coding
  ENST00000504450 SH3BP2-024 2826850-2833048 retained_intron
  ENST00000505941 SH3BP2-023 2824751-2829805 retained_intron
  ENST00000506932 SH3BP2-021 2820669-2824782 retained_intron
  ENST00000508338 SH3BP2-026 2814834-2818225 processed_transcript
  ENST00000508385 SH3BP2-014 2798998-2827652 protein_coding
  ENST00000509677 SH3BP2-028 2818716-2825101 retained_intron
  ENST00000510074 SH3BP2-004 2794159-2824914 retained_intron
  ENST00000510193 SH3BP2-011 2793724-2796646 processed_transcript
  ENST00000510204 SH3BP2-008 2826325-2834289 retained_intron
  ENST00000511185 SH3BP2-005 2812301-2827296 retained_intron
  ENST00000511237 SH3BP2-013 2794159-2824782 retained_intron
  ENST00000511663 SH3BP2-016 2809779-2827317 retained_intron
  ENST00000511747 SH3BP2-006 2818185-2834289 protein_coding
  ENST00000512014 SH3BP2-017 2811798-2827670 protein_coding
  ENST00000512131 SH3BP2-020 2793072-2824917 retained_intron
  ENST00000513020 SH3BP2-015 2799069-2825220 nonsense_mediated_decay
  ENST00000513069 SH3BP2-025 2829797-2833960 nonsense_mediated_decay
  ENST00000513095 SH3BP2-018 2811930-2825178 protein_coding
  ENST00000515183 SH3BP2-022 2824665-2829734 processed_transcript
  ENST00000515737 SH3BP2-003 2818814-2834287 nonsense_mediated_decay
  ENST00000515802 SH3BP2-009 2826696-2834289 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356331ENST00000435136ENST00000442312ENST00000452765ENST00000503393ENST00000504294ENST00000511237ENST00000511747ENST00000512014ENST00000513069ENST00000515183ENST00000515802
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356331 N/A N/A N/A 0.465±0.00 N/A N/A 0.143±0.00 N/A N/A N/A N/A 0.736±0.00 N/A 0.539±0.00
ENST00000435136 5.715±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.353±0.00 4.434±0.27 N/A
ENST00000442312 N/A N/A 1.287±0.00 N/A 0.999±0.20 N/A N/A N/A 0.678±0.00 N/A N/A 0.766±0.08 N/A N/A
ENST00000452765 N/A N/A N/A N/A N/A 3.494±0.00 3.072±0.00 N/A 5.372±0.00 13.285±0.00 1.616±0.00 3.545±0.17 4.209±1.80 3.361±0.00
ENST00000503393 1.641±0.00 3.541±0.00 N/A 0.523±0.00 4.741±0.00 N/A 1.230±1.03 N/A N/A N/A 0.646±0.00 1.100±0.24 N/A 0.687±0.00
ENST00000504294 N/A N/A N/A N/A N/A N/A 1.859±0.00 13.250±0.00 N/A 5.743±0.00 1.608±0.00 N/A N/A N/A
ENST00000511237 N/A N/A N/A 2.828±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.370±0.00 3.031±0.00
ENST00000512014 N/A N/A N/A 1.736±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.459±0.00 4.075±0.00 5.854±0.00
ENST00000515183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 13.037±0.00 5.733±0.00 N/A
ENST00000515802 N/A N/A 1.199±0.00 N/A N/A N/A N/A N/A N/A 1.450±0.00 1.167±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SI CIL_0003SI_0001 CGP 4:2741648-2841098
CIL_00074C CIL_00074C_0001 CGP 4:2793023-2930076

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0007165 TAS signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0017124 IEA SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021982 sh3bp2 SH3-domain binding protein 2 protein_coding Danio_rerio
ENSMUSG00000054520 Sh3bp2 SH3-domain binding protein 2 protein_coding Mus_musculus

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