C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SH3-domain binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503393 SH3BP2-202 ENSG00000087266 9606 + 4:2818185-2841096 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastHeartMuscleOvaryTestisENST00000503393
Transcript ID Adipose Adrenal Brain Breast Heart Muscle Ovary Testis
ENST00000503393 1.641±0.00 3.541±0.00 0.523±0.00 4.741±0.00 1.230±1.03 0.646±0.00 1.100±0.24 0.687±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003SI CIL_0003SI_0001 CGP 4:2741648-2841098
CIL_00074C CIL_00074C_0001 CGP 4:2793023-2930076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005515 IPI protein binding
GO:0007165 TAS signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0017124 IEA SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118545 Sh3bp2-003 protein_coding Mus_musculus 0 1779
ENSMUST00000179943 Sh3bp2-201 protein_coding Mus_musculus 0 1714
ENSMUST00000101316 Sh3bp2-002 protein_coding Mus_musculus 0 1642
ENSMUST00000067638 Sh3bp2-001 protein_coding Mus_musculus 0 1642

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