C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 15 (oligopeptide transporter), member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000088386 SLC15A1 9606 - 13:98683801-98752654 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376494 SLC15A1-002 98720527-98726567 retained_intron
  ENST00000376503 SLC15A1-001 98683801-98752654 protein_coding
  ENST00000613008 SLC15A1-201 98720527-98726567 protein_coding
  ENST00000618992 SLC15A1-202 98684631-98752654 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376494ENST00000376503ENST00000618992
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376494 0.089±0.00 N/A 0.096±0.00 0.103±0.00 0.105±0.01 0.082±0.00 N/A N/A 0.062±0.00 0.127±0.10 0.018±0.00 N/A 0.131±0.00
ENST00000376503 0.209±0.00 0.322±0.00 0.172±0.00 0.157±0.00 0.155±0.00 0.049±0.00 3.616±0.94 3.557±0.00 0.116±0.00 0.012±0.00 2.219±1.99 0.150±0.09 0.234±0.19
ENST00000618992 N/A N/A N/A N/A 0.097±0.00 N/A 2.779±0.00 0.050±0.00 0.072±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004G0 CIL_0004G0_0002 CGP 13:98445185-98752654
CIL_0004FT CIL_0004FT_0002 CGP 13:98683801-99086625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0005427 IEA proton-dependent oligopeptide secondary active transmembrane transporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 TAS ion transport
GO:0006857 IEA oligopeptide transport
GO:0007586 TAS digestion
GO:0015031 IEA protein transport
GO:0015198 IEA oligopeptide transporter activity
GO:0015333 TAS peptide:proton symporter activity
GO:0015992 TAS proton transport
GO:0016020 TAS:IEA membrane
GO:0016021 IEA integral component of membrane
GO:0035672 IEA oligopeptide transmembrane transport
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000044528 slc15a1b solute carrier family 15 (oligopeptide transporter), member 1b protein_coding Danio_rerio
ENSDARG00000077192 slc15a1a solute carrier family 15 (oligopeptide transporter), member 1a protein_coding Danio_rerio
ENSMUSG00000025557 Slc15a1 solute carrier family 15 (oligopeptide transporter), member 1 protein_coding Mus_musculus

Loading